eF-site ID 3err-B
PDB Code 3err
Chain B

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Title Microtubule binding domain from mouse cytoplasmic dynein as a fusion with seryl-tRNA synthetase
Classification LIGASE
Compound fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA synthetase from Thermus thermophilus
Source Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (SYS_THET2)
Sequence B:  DLKRLRQEPEVFHRAIREKGVALDLEALLAVDEQLHKQQE
VIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRS
MANPPAAVKLALESIALLLGESTTDWKQIRSIIMRENFIP
TIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLAA
GPMVKWAIAQLNYADMLKRVEPLRNELQKLEDDAKDNQQK
LEALLLQVPLPPWPGAPVGGEEANREIKRVGGPPEFSFPP
LDHVALMEKNGWWEPRISQVSGSRSYALKGDLALYELALL
RFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVW
AIAETDLYLTGTAEVVLNALHSGEILPYEALPLRYAGYAP
AFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDR
AFQELLENAEEILRLLELPYRLVEVATGDMGPGKWRQVDI
EVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRY
AYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYMG
KEVLEPG
Description


Functional site

1) chain B
residue 256
type
sequence R
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

2) chain B
residue 258
type
sequence E
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

3) chain B
residue 270
type
sequence M
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

4) chain B
residue 271
type
sequence R
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

5) chain B
residue 272
type
sequence V
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

6) chain B
residue 275
type
sequence F
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

7) chain B
residue 277
type
sequence K
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

8) chain B
residue 345
type
sequence E
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

9) chain B
residue 346
type
sequence T
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

10) chain B
residue 347
type
sequence H
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

11) chain B
residue 348
type
sequence S
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

12) chain B
residue 380
type
sequence T
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

13) chain B
residue 386
type
sequence R
description BINDING SITE FOR RESIDUE AMP B1508
source : AC2

14) chain B
residue 256
type catalytic
sequence R
description 884
source MCSA : MCSA2

15) chain B
residue 271
type catalytic
sequence R
description 884
source MCSA : MCSA2

16) chain B
residue 345
type catalytic
sequence E
description 884
source MCSA : MCSA2

17) chain B
residue 348
type catalytic
sequence S
description 884
source MCSA : MCSA2

18) chain B
residue 386
type catalytic
sequence R
description 884
source MCSA : MCSA2

19) chain B
residue 279
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_00176
source Swiss-Prot : SWS_FT_FI1

20) chain B
residue 345
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_00176
source Swiss-Prot : SWS_FT_FI1

21) chain B
residue 380
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00176
source Swiss-Prot : SWS_FT_FI1

22) chain B
residue 225
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00176
source Swiss-Prot : SWS_FT_FI1

23) chain B
residue 256
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00176
source Swiss-Prot : SWS_FT_FI1

24) chain B
residue 272
type BINDING
sequence V
description BINDING => ECO:0000255|HAMAP-Rule:MF_00176
source Swiss-Prot : SWS_FT_FI1


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