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eF-site ID
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3ehz-B |
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PDB Code
|
3ehz |
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Chain
|
B |
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click to enlarge
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Title
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X-ray structure of the pentameric ligand gated ion channel of Gloebacter violaceus (GLIC) in a presumptive open conformation |
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Classification
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MEMBRANE PROTEIN |
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Compound
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Glr4197 protein |
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Source
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Gloeobacter violaceus (Q7NDN8_GLOVI) |
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Sequence
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B: |
PPPIADEPLTVNTGIYLIECYSLDDKAETFKVNAFLSLSW
KDRRLAFDPVRSGVRVKTYEPEAIWIPEIRFVNVENARDA
DVVDISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLH
IYLIVRSVDTRNIVLAVDLEKVGKNDDVFLTGWDIESFTA
VVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPMLF
ILFISWTAFWSTSYEANVTLVVSTLIAHIAFNILVETNLP
KTPYMTYTGAIIFMIYLFYFVAVIEVTVQHYLKVESQPAR
AASITRASRIAFPVVFLLANIILAFLFFGF
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Description
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Functional site
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1)
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chain |
B |
| residue |
193-215 |
| type |
TRANSMEM |
| sequence |
YFSYIPNIILPMLFILFISWTAF
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| description |
Helical
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| source |
Swiss-Prot : SWS_FT_FI1
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2)
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chain |
B |
| residue |
219-243 |
| type |
TRANSMEM |
| sequence |
SYEANVTLVVSTLIAHIAFNILVET
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| description |
Helical
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
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3)
|
chain |
B |
| residue |
252-280 |
| type |
TRANSMEM |
| sequence |
TYTGAIIFMIYLFYFVAVIEVTVQHYLKV
|
| description |
Helical
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
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4)
|
chain |
B |
| residue |
284-316 |
| type |
TRANSMEM |
| sequence |
PARAASITRASRIAFPVVFLLANIILAFLFFGF
|
| description |
Helical
|
| source |
Swiss-Prot : SWS_FT_FI1
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|
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5)
|
chain |
B |
| residue |
216-218 |
| type |
TOPO_DOM |
| sequence |
WST
|
| description |
Cytoplasmic => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
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6)
|
chain |
B |
| residue |
281-283 |
| type |
TOPO_DOM |
| sequence |
ESQ
|
| description |
Cytoplasmic => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
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7)
|
chain |
B |
| residue |
244-251 |
| type |
TOPO_DOM |
| sequence |
NLPKTPYM
|
| description |
Periplasmic => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI3
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