eF-site ID 3ehz-ABCDE
PDB Code 3ehz
Chain A, B, C, D, E

click to enlarge
Title X-ray structure of the pentameric ligand gated ion channel of Gloebacter violaceus (GLIC) in a presumptive open conformation
Classification MEMBRANE PROTEIN
Compound Glr4197 protein
Source Gloeobacter violaceus (Q7NDN8_GLOVI)
Sequence A:  PPPIADEPLTVNTGIYLIECYSLDDKAETFKVNAFLSLSW
KDRRLAFDPVRSGVRVKTYEPEAIWIPEIRFVNVENARDA
DVVDISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLH
IYLIVRSVDTRNIVLAVDLEKVGKNDDVFLTGWDIESFTA
VVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPMLF
ILFISWTAFWSTSYEANVTLVVSTLIAHIAFNILVETNLP
KTPYMTYTGAIIFMIYLFYFVAVIEVTVQHYLKVESQPAR
AASITRASRIAFPVVFLLANIILAFLFFGF
B:  PPPIADEPLTVNTGIYLIECYSLDDKAETFKVNAFLSLSW
KDRRLAFDPVRSGVRVKTYEPEAIWIPEIRFVNVENARDA
DVVDISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLH
IYLIVRSVDTRNIVLAVDLEKVGKNDDVFLTGWDIESFTA
VVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPMLF
ILFISWTAFWSTSYEANVTLVVSTLIAHIAFNILVETNLP
KTPYMTYTGAIIFMIYLFYFVAVIEVTVQHYLKVESQPAR
AASITRASRIAFPVVFLLANIILAFLFFGF
C:  PPPIADEPLTVNTGIYLIECYSLDDKAETFKVNAFLSLSW
KDRRLAFDPVRSGVRVKTYEPEAIWIPEIRFVNVENARDA
DVVDISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLH
IYLIVRSVDTRNIVLAVDLEKVGKNDDVFLTGWDIESFTA
VVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPMLF
ILFISWTAFWSTSYEANVTLVVSTLIAHIAFNILVETNLP
KTPYMTYTGAIIFMIYLFYFVAVIEVTVQHYLKVESQPAR
AASITRASRIAFPVVFLLANIILAFLFFGF
D:  PPPIADEPLTVNTGIYLIECYSLDDKAETFKVNAFLSLSW
KDRRLAFDPVRSGVRVKTYEPEAIWIPEIRFVNVENARDA
DVVDISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLH
IYLIVRSVDTRNIVLAVDLEKVGKNDDVFLTGWDIESFTA
VVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPMLF
ILFISWTAFWSTSYEANVTLVVSTLIAHIAFNILVETNLP
KTPYMTYTGAIIFMIYLFYFVAVIEVTVQHYLKVESQPAR
AASITRASRIAFPVVFLLANIILAFLFFGF
E:  PPPIADEPLTVNTGIYLIECYSLDDKAETFKVNAFLSLSW
KDRRLAFDPVRSGVRVKTYEPEAIWIPEIRFVNVENARDA
DVVDISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLH
IYLIVRSVDTRNIVLAVDLEKVGKNDDVFLTGWDIESFTA
VVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPMLF
ILFISWTAFWSTSYEANVTLVVSTLIAHIAFNILVETNLP
KTPYMTYTGAIIFMIYLFYFVAVIEVTVQHYLKVESQPAR
AASITRASRIAFPVVFLLANIILAFLFFGF
Description


Functional site
1) chain A
residue 193-215
type TRANSMEM
sequence YFSYIPNIILPMLFILFISWTAF
description Helical
source Swiss-Prot : SWS_FT_FI1
2) chain C
residue 219-243
type TRANSMEM
sequence SYEANVTLVVSTLIAHIAFNILVET
description Helical
source Swiss-Prot : SWS_FT_FI1
3) chain C
residue 252-280
type TRANSMEM
sequence TYTGAIIFMIYLFYFVAVIEVTVQHYLKV
description Helical
source Swiss-Prot : SWS_FT_FI1
4) chain C
residue 284-316
type TRANSMEM
sequence PARAASITRASRIAFPVVFLLANIILAFLFFGF
description Helical
source Swiss-Prot : SWS_FT_FI1
5) chain D
residue 193-215
type TRANSMEM
sequence YFSYIPNIILPMLFILFISWTAF
description Helical
source Swiss-Prot : SWS_FT_FI1
6) chain D
residue 219-243
type TRANSMEM
sequence SYEANVTLVVSTLIAHIAFNILVET
description Helical
source Swiss-Prot : SWS_FT_FI1
7) chain D
residue 252-280
type TRANSMEM
sequence TYTGAIIFMIYLFYFVAVIEVTVQHYLKV
description Helical
source Swiss-Prot : SWS_FT_FI1
8) chain D
residue 284-316
type TRANSMEM
sequence PARAASITRASRIAFPVVFLLANIILAFLFFGF
description Helical
source Swiss-Prot : SWS_FT_FI1
9) chain E
residue 193-215
type TRANSMEM
sequence YFSYIPNIILPMLFILFISWTAF
description Helical
source Swiss-Prot : SWS_FT_FI1
10) chain E
residue 219-243
type TRANSMEM
sequence SYEANVTLVVSTLIAHIAFNILVET
description Helical
source Swiss-Prot : SWS_FT_FI1
11) chain E
residue 252-280
type TRANSMEM
sequence TYTGAIIFMIYLFYFVAVIEVTVQHYLKV
description Helical
source Swiss-Prot : SWS_FT_FI1
12) chain A
residue 219-243
type TRANSMEM
sequence SYEANVTLVVSTLIAHIAFNILVET
description Helical
source Swiss-Prot : SWS_FT_FI1
13) chain E
residue 284-316
type TRANSMEM
sequence PARAASITRASRIAFPVVFLLANIILAFLFFGF
description Helical
source Swiss-Prot : SWS_FT_FI1
14) chain A
residue 252-280
type TRANSMEM
sequence TYTGAIIFMIYLFYFVAVIEVTVQHYLKV
description Helical
source Swiss-Prot : SWS_FT_FI1
15) chain A
residue 284-316
type TRANSMEM
sequence PARAASITRASRIAFPVVFLLANIILAFLFFGF
description Helical
source Swiss-Prot : SWS_FT_FI1
16) chain B
residue 193-215
type TRANSMEM
sequence YFSYIPNIILPMLFILFISWTAF
description Helical
source Swiss-Prot : SWS_FT_FI1
17) chain B
residue 219-243
type TRANSMEM
sequence SYEANVTLVVSTLIAHIAFNILVET
description Helical
source Swiss-Prot : SWS_FT_FI1
18) chain B
residue 252-280
type TRANSMEM
sequence TYTGAIIFMIYLFYFVAVIEVTVQHYLKV
description Helical
source Swiss-Prot : SWS_FT_FI1
19) chain B
residue 284-316
type TRANSMEM
sequence PARAASITRASRIAFPVVFLLANIILAFLFFGF
description Helical
source Swiss-Prot : SWS_FT_FI1
20) chain C
residue 193-215
type TRANSMEM
sequence YFSYIPNIILPMLFILFISWTAF
description Helical
source Swiss-Prot : SWS_FT_FI1
21) chain A
residue 216-218
type TOPO_DOM
sequence WST
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
22) chain E
residue 281-283
type TOPO_DOM
sequence ESQ
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
23) chain A
residue 281-283
type TOPO_DOM
sequence ESQ
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
24) chain B
residue 216-218
type TOPO_DOM
sequence WST
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
25) chain B
residue 281-283
type TOPO_DOM
sequence ESQ
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
26) chain C
residue 216-218
type TOPO_DOM
sequence WST
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
27) chain C
residue 281-283
type TOPO_DOM
sequence ESQ
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
28) chain D
residue 216-218
type TOPO_DOM
sequence WST
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
29) chain D
residue 281-283
type TOPO_DOM
sequence ESQ
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
30) chain E
residue 216-218
type TOPO_DOM
sequence WST
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
31) chain A
residue 244-251
type TOPO_DOM
sequence NLPKTPYM
description Periplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI3
32) chain B
residue 244-251
type TOPO_DOM
sequence NLPKTPYM
description Periplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI3
33) chain C
residue 244-251
type TOPO_DOM
sequence NLPKTPYM
description Periplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI3
34) chain D
residue 244-251
type TOPO_DOM
sequence NLPKTPYM
description Periplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI3
35) chain E
residue 244-251
type TOPO_DOM
sequence NLPKTPYM
description Periplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

Display surface

Download
Links