eF-site ID 3edy-A
PDB Code 3edy
Chain A

click to enlarge
Title Crystal Structure of the Precursor Form of Human Tripeptidyl-Peptidase 1
Classification HYDROLASE
Compound Tripeptidyl-peptidase 1
Source Homo sapiens (Human) (TPP1_HUMAN)
Sequence A:  SYSPEPDQRRTLPPGWVSLGRADPEEELSLTFALRQQNVE
RLSELVQAVSDPSSPQYGKYLTLENVADLVRPSPLTLHTV
QKWLLAAGAQKCHSVITQDFLTCWLSIRQAELLLPGAEFH
HYVGGPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPT
SSLRQRPEPQVTGTVGLHLGVTPSVIRKRYNLTSQDVGSG
TSNNSQACAQFLEQYFHDSDLAQFMRLFGGNFAHQASVAR
VVGQQGRGRAGIEASLDVQYLMSAGANISTWVYSSPGRHE
GQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQR
VNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFP
ASSPYVTTVGGTSFQEPFLITNEIVDYISGGGFSNVFPRP
SYQEEAVTKFLSSSPHLPPSSYFNASGRAYPDVAALSDGY
WVVSNRVPIPWVSGTSASTPVFGGILSLINEHRILSGRPP
LGFLNPRLYQQHGAGLFDVTRGCHESCLDEEVEGQGFCSG
PGWDPVTGWGTPNFPALLKTLLNP
Description (1)  Crystal Structure of the Precursor Form of Human Tripeptidyl-Peptidase 1


Functional site

1) chain A
residue 272
type ACT_SITE
sequence E
description Charge relay system => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 276
type ACT_SITE
sequence D
description Charge relay system => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 475
type ACT_SITE
sequence S
description Charge relay system => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967, ECO:0000305|PubMed:11054422
source Swiss-Prot : SWS_FT_FI2

4) chain A
residue 517
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967
source Swiss-Prot : SWS_FT_FI3

5) chain A
residue 518
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967
source Swiss-Prot : SWS_FT_FI3

6) chain A
residue 539
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967
source Swiss-Prot : SWS_FT_FI3

7) chain A
residue 541
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967
source Swiss-Prot : SWS_FT_FI3

8) chain A
residue 543
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967
source Swiss-Prot : SWS_FT_FI3

9) chain A
residue 210
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967, ECO:0000269|PubMed:19159218
source Swiss-Prot : SWS_FT_FI4

10) chain A
residue 313
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967, ECO:0000269|PubMed:19159218
source Swiss-Prot : SWS_FT_FI4

11) chain A
residue 222
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
source Swiss-Prot : SWS_FT_FI5

12) chain A
residue 286
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967
source Swiss-Prot : SWS_FT_FI6

13) chain A
residue 443
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:12754519, ECO:0000269|PubMed:19038966, ECO:0000269|PubMed:19038967, ECO:0000269|PubMed:19159218
source Swiss-Prot : SWS_FT_FI7


Display surface

Download
Links