eF-site ID 3ecr-AB
PDB Code 3ecr
Chain A, B

click to enlarge
Title Structure of human porphobilinogen deaminase
Classification TRANSFERASE
Compound Porphobilinogen deaminase
Source Homo sapiens (Human) (HEM3_HUMAN)
Sequence A:  MRVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAML
FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKR
ENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQR
KFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM
GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVG
VLHDPETLLRCIAERAFLRHLECSVPVAVHTAMKDGQLYL
TGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGI
TARNIPRGPQLAAQNLGISLANLLLSKGAKNILDVARQ
B:  RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAMKI
GEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIG
AICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRA
AQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATA
GLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDI
LDLVGVLHDPETLLRCIAERAFLRHLECSVPVAVHTAMKD
GQLYLTGGVWSLDGSDSIQETMQATIHPQLVGITARNIPR
GPQLAAQNLGISLANLLLSKGAKNILDVAR
Description


Functional site

1) chain A
residue 99
type
sequence S
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

2) chain A
residue 101
type
sequence K
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

3) chain A
residue 102
type
sequence D
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

4) chain A
residue 148
type
sequence T
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

5) chain A
residue 149
type
sequence S
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

6) chain A
residue 150
type
sequence S
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

7) chain A
residue 152
type
sequence R
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

8) chain A
residue 153
type
sequence R
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

9) chain A
residue 176
type
sequence R
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

10) chain A
residue 191
type
sequence L
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

11) chain A
residue 192
type
sequence A
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

12) chain A
residue 220
type
sequence Q
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

13) chain A
residue 221
type
sequence G
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

14) chain A
residue 264
type
sequence C
description BINDING SITE FOR RESIDUE DPM A 365
source : AC1

15) chain B
residue 74
type
sequence I
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

16) chain B
residue 99
type
sequence S
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

17) chain B
residue 101
type
sequence K
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

18) chain B
residue 102
type
sequence D
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

19) chain B
residue 149
type
sequence S
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

20) chain B
residue 150
type
sequence S
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

21) chain B
residue 152
type
sequence R
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

22) chain B
residue 153
type
sequence R
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

23) chain B
residue 176
type
sequence R
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

24) chain B
residue 191
type
sequence L
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

25) chain B
residue 192
type
sequence A
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

26) chain B
residue 220
type
sequence Q
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

27) chain B
residue 221
type
sequence G
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

28) chain B
residue 264
type
sequence C
description BINDING SITE FOR RESIDUE DPM B 365
source : AC2

29) chain A
residue 150
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI2

30) chain B
residue 150
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI2

31) chain B
residue 77
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P22907
source Swiss-Prot : SWS_FT_FI3

32) chain A
residue 264
type MOD_RES
sequence C
description S-(dipyrrolylmethanemethyl)cysteine => ECO:0000269|PubMed:18936296
source Swiss-Prot : SWS_FT_FI4

33) chain B
residue 264
type MOD_RES
sequence C
description S-(dipyrrolylmethanemethyl)cysteine => ECO:0000269|PubMed:18936296
source Swiss-Prot : SWS_FT_FI4

34) chain A
residue 253-269
type prosite
sequence ERAFLRHLECSVPVA
description PORPHOBILINOGEN_DEAM Porphobilinogen deaminase cofactor-binding site. ERaFlrhLeGGCsVPVA
source prosite : PS00533


Display surface

Download
Links