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eF-site ID
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3e6f-ABP |
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PDB Code
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3e6f |
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Chain
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A, B, P |
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click to enlarge
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Title
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MHC CLASS I H-2Dd Heavy chain complexed with Beta-2 Microglobulin and a variant peptide, PA9, from the Human immunodeficiency virus (BaL) envelope glycoprotein 120 |
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Classification
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IMMUNE SYSTEM |
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Compound
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H-2 class I histocompatibility antigen, D-D alpha chain |
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Source
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Mus musculus (Mouse) (Q9YZ87_9HIV1) |
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Sequence
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A: |
SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAE
NPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTA
LRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGC
DYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLE
GECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTL
RCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTF
QKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRW
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| B: |
MQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQML
KNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC
RVKHASMAEPKTVYWDRDM
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| P: |
IGPGRAFYA
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Description
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Functional site
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|
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1)
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chain |
B |
| residue |
78-84 |
| type |
prosite |
| sequence |
YACRVKH
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| description |
IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVKH
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| source |
prosite : PS00290
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2)
|
chain |
A |
| residue |
257-263 |
| type |
prosite |
| sequence |
YTCHVEH
|
| description |
IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVKH
|
| source |
prosite : PS00290
|
|
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3)
|
chain |
A |
| residue |
86 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
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4)
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chain |
A |
| residue |
176 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI1
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