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eF-site ID
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3e3j-C |
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PDB Code
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3e3j |
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Chain
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C |
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click to enlarge
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Title
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Crystal Structure of an Intermediate Complex of T7 RNAP and 8nt of RNA |
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Classification
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Transferase/RNA/DNA |
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Compound
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DNA-directed RNA polymerase |
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Source
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Enterobacteria phage T7 (Bacteriophage T7) (3E3J) |
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Sequence
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C: |
KNDFSDIELAAIPFNTLADHYGERLAREQLALEHESYEMG
EARFRKMFLITTLLPKMIARINDWFEEVKAKRGKRPTAFQ
FLQEIKPEAVAYITIKTTLACLTSADNTTVQAVASAIGRA
IEDEARFGRIRDLEAKHFKKNVKAFMQVVEADMLSKGLLG
GEAWSSWHKEDSIHVGVRCIEMLIESTGMVSLHRQNAGVV
GQDSETIELAPEYAEAIAGISLMFQPCVVPPKPWTGITGG
GYWANGRRPLALVRTHSKKALMRYEDVYMPEVYKAINIAQ
NTAWKINKKVLAVANVITKWKHCPVEDIPAIEREELPMKP
EDIDMNPEALTAWKRAAAAVYRKDKARKSRRISLEFMLEQ
ANKFANHKAIWFPYNMDWRGRVYAVSMFNPQGNDMTKGLL
TLAKGKPIGKEGYYWLKIHGANCAGVDKVPFPERIKFIEE
NHENIMACAKSPLENTWWAEQDSPFCFLAFCFEYAGVQHH
GLSYNCSLPLAFDGSCSGIQHFSAMLRDEVGGRAVNLLPS
ETVQDIYGIVAKKVNEILQADAINGTDNEVVTVTISEKVK
LGTKALAGQWLAYGVTRSVTKRSVMTLAYGSKEFGFRQQV
LEDTIQPAIDSGKGLMFTQPNQAAGYMAKLIWESVSVTVV
AAVEAMNWLKSAAKLLAAEVKDKKTGEILRKRCAVHWVTP
DGFPVWQEYKKPIQTRLNLMFLGQFRLQPTINTNKDSEID
AHKQESGIAPNFVHSQDGSHLRKTVVWAHEKYGIESFALI
HDSFGTIPADAANLFKAVRETMVDTYESCDVLADFYDQFA
DQLHESQLDKMPALPAKGNLNLRDILESDFAFA
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Description
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Functional site
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1)
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chain |
C |
| residue |
537 |
| type |
ACT_SITE |
| sequence |
D
|
| description |
ACT_SITE => ECO:0000269|PubMed:8133519
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| source |
Swiss-Prot : SWS_FT_FI1
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2)
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chain |
C |
| residue |
812 |
| type |
ACT_SITE |
| sequence |
D
|
| description |
ACT_SITE => ECO:0000269|PubMed:8133519
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| source |
Swiss-Prot : SWS_FT_FI1
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3)
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chain |
C |
| residue |
631 |
| type |
ACT_SITE |
| sequence |
K
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| description |
ACT_SITE => ECO:0000269|PubMed:1847871, ECO:0000269|PubMed:8133519
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| source |
Swiss-Prot : SWS_FT_FI2
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4)
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chain |
C |
| residue |
625-639 |
| type |
prosite |
| sequence |
VTRSVTKRSVMTLAY
|
| description |
RNA_POL_PHAGE_2 Bacteriophage-type RNA polymerase family active site signature 2. VtRsvtKrsVMTlaY
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| source |
prosite : PS00489
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5)
|
chain |
C |
| residue |
533-544 |
| type |
prosite |
| sequence |
PLAFDGSCSGIQ
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| description |
RNA_POL_PHAGE_1 Bacteriophage-type RNA polymerase family active site signature 1. PLafDGSCSGIQ
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| source |
prosite : PS00900
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