eF-site ID 3e3j-BC PDB Code 3e3j Chain B, C click to enlarge Title Crystal Structure of an Intermediate Complex of T7 RNAP and 8nt of RNA Classification Transferase/RNA/DNA Compound DNA-directed RNA polymerase Source null (3E3J) Sequence B:  KNDFSDIELAAIPFNTLADHYGERLAREQLALEHESYEMG EARFRKMFLITTLLPKMIARINDWFEEVKAKRGKRPTAFQ FLQEIKPEAVAYITIKTTLACLTSADNTTVQAVASAIGRA IEDEARFGRIRDLEAKHFKKNVKAFMQVVEADMLSKGLLG GEAWSSWHKEDSIHVGVRCIEMLIESTGMVSLHRQNAGVV GQDSETIELAPEYAEAIAGISLMFQPCVVPPKPWTGITGG GYWANGRRPLALVRTHSKKALMRYEDVYMPEVYKAINIAQ NTAWKINKKVLAVANVITKWKHCPVEDIPAIEREELPMKP EDIDMNPEALTAWKRAAAAVYRKDKARKSRRISLEFMLEQ ANKFANHKAIWFPYNMDWRGRVYAVSMFNPQGNDMTKGLL TLAKGKPIGKEGYYWLKIHGANCAGVDKVPFPERIKFIEE NHENIMACAKSPLENTWWAEQDSPFCFLAFCFEYAGVQHH GLSYNCSLPLAFDGSCSGIQHFSAMLRDEVGGRAVNLLPS ETVQDIYGIVAKKVNEILQADAINGTDNEVVTVTISEKVK LGTKALAGQWLAYGVTRSVTKRSVMTLAYGSKEFGFRQQV LEDTIQPAIDSGKGLMFTQPNQAAGYMAKLIWESVSVTVV AAVEAMNWLKSAAKLLAAEVKDKKTGEILRKRCAVHWVTP DGFPVWQEYKKPIQTRLNLMFLGQFRLQPTINTNKDSEID AHKQESGIAPNFVHSQDGSHLRKTVVWAHEKYGIESFALI HDSFGTIPADAANLFKAVRETMVDTYESCDVLADFYDQFA DQLHESQLDKMPALPAKGNLNLRDILESDFAFA C:  KNDFSDIELAAIPFNTLADHYGERLAREQLALEHESYEMG EARFRKMFLITTLLPKMIARINDWFEEVKAKRGKRPTAFQ FLQEIKPEAVAYITIKTTLACLTSADNTTVQAVASAIGRA IEDEARFGRIRDLEAKHFKKNVKAFMQVVEADMLSKGLLG GEAWSSWHKEDSIHVGVRCIEMLIESTGMVSLHRQNAGVV GQDSETIELAPEYAEAIAGISLMFQPCVVPPKPWTGITGG GYWANGRRPLALVRTHSKKALMRYEDVYMPEVYKAINIAQ NTAWKINKKVLAVANVITKWKHCPVEDIPAIEREELPMKP EDIDMNPEALTAWKRAAAAVYRKDKARKSRRISLEFMLEQ ANKFANHKAIWFPYNMDWRGRVYAVSMFNPQGNDMTKGLL TLAKGKPIGKEGYYWLKIHGANCAGVDKVPFPERIKFIEE NHENIMACAKSPLENTWWAEQDSPFCFLAFCFEYAGVQHH GLSYNCSLPLAFDGSCSGIQHFSAMLRDEVGGRAVNLLPS ETVQDIYGIVAKKVNEILQADAINGTDNEVVTVTISEKVK LGTKALAGQWLAYGVTRSVTKRSVMTLAYGSKEFGFRQQV LEDTIQPAIDSGKGLMFTQPNQAAGYMAKLIWESVSVTVV AAVEAMNWLKSAAKLLAAEVKDKKTGEILRKRCAVHWVTP DGFPVWQEYKKPIQTRLNLMFLGQFRLQPTINTNKDSEID AHKQESGIAPNFVHSQDGSHLRKTVVWAHEKYGIESFALI HDSFGTIPADAANLFKAVRETMVDTYESCDVLADFYDQFA DQLHESQLDKMPALPAKGNLNLRDILESDFAFA Description Functional site 1) chain C residue 631 type ACT_SITE sequence K description ACT_SITE => ECO:0000269|PubMed:1847871, ECO:0000269|PubMed:8133519 source Swiss-Prot : SWS_FT_FI2 2) chain B residue 631 type ACT_SITE sequence K description ACT_SITE => ECO:0000269|PubMed:1847871, ECO:0000269|PubMed:8133519 source Swiss-Prot : SWS_FT_FI2 3) chain C residue 537 type ACT_SITE sequence D description ACT_SITE => ECO:0000269|PubMed:8133519 source Swiss-Prot : SWS_FT_FI1 4) chain C residue 812 type ACT_SITE sequence D description ACT_SITE => ECO:0000269|PubMed:8133519 source Swiss-Prot : SWS_FT_FI1 5) chain B residue 537 type ACT_SITE sequence D description ACT_SITE => ECO:0000269|PubMed:8133519 source Swiss-Prot : SWS_FT_FI1 6) chain B residue 812 type ACT_SITE sequence D description ACT_SITE => ECO:0000269|PubMed:8133519 source Swiss-Prot : SWS_FT_FI1 7) chain C residue 625-639 type prosite sequence VTRSVTKRSVMTLAY description RNA_POL_PHAGE_2 Bacteriophage-type RNA polymerase family active site signature 2. VtRsvtKrsVMTlaY source prosite : PS00489 8) chain C residue 533-544 type prosite sequence PLAFDGSCSGIQ description RNA_POL_PHAGE_1 Bacteriophage-type RNA polymerase family active site signature 1. PLafDGSCSGIQ source prosite : PS00900

Display surface Download Links