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eF-site ID
|
3e0j-ABCDEFGH |
PDB Code
|
3e0j |
Chain
|
A, B, C, D, E, F, G, H |
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click to enlarge
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Title
|
X-ray structure of the complex of regulatory subunits of human DNA polymerase delta |
Classification
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TRANSFERASE |
Compound
|
DNA polymerase subunit delta-2 |
Source
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(DPOD3_HUMAN) |
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Sequence
|
A: |
HHHGMFSEQAAQRAHTLLSPPSANNATFARVPVATYTNSS
QPFRLYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPE
EKCCVVGTLFKAMSKYIHPDDELVLEDELQRIKLKGTIDV
SKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPL
DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEG
EQCSAAHVSRVILAGNLLSHLTKKTQAASVEAVKMLDEIL
LQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYS
TLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLE
ILEWTLRVRHISPTAPDTYKTDPFIFPECPHVYFCGNTPS
FGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQP
ISFSGFGAEDDDLGGL
|
B: |
ADQLYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQML
YDYVERKRKENSGAQLHVTYLVSGSLIQNGHSCHKVAVVR
EDKLEAVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYDI
LKSNLQNCSKFSAIQCAAAVPRA
|
C: |
HHHGMFSEQAAQRAHTLLSPPSANNATFARVPVATYTNSS
QPFRLIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP
EEKCCVVGTLFKAMSKYIHPDDELVLEDELQRIKLKGTID
VSKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPP
LDTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDE
GEQCSAAHVSRVILAGNLLSHLTKKTQAASVEAVKMLDEI
LLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY
STLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHL
EILEWTLRVRHISPTAPDTKTDPFIFPECPHVYFCGNTPS
FGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQP
ISFSGFGAE
|
D: |
ADQLYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQML
YDYVERKRKENSGAQLHVTYLVSGSLIQNGHSCHKVAVVR
EDKLEAVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYDI
LKSNLQNCSKFSAIQCAAAVPRA
|
E: |
HHHGMFSEQAAQRAHTLLSPPSANNATFARVPVATYTNSS
QPFRLYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPE
EKCCVVGTLFKAMSKYIHPDDELVLEDELQRIKLKGTIDV
SKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPL
DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEG
EQCSAAHVSRVILAGNLLSHLTKKTQAASVEAVKMLDEIL
LQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYS
TLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLE
ILEWTLRVRHISPTAPDTKTDPFIFPECPHVYFCGNTPSF
GSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPI
SFSGFGAE
|
F: |
ADQLYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQML
YDYVERKRKENSGAQLHVTYLVSGSLIQNGHSCHKVAVVR
EDKLEAVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYDI
LKSNLQNCSKFSAIQCAAAVPRA
|
G: |
HHHGMFSEQAAQRAHTLLSPPSANNATFARVPVATYTNSS
QPFRLYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPE
EKCCVVGTLFKAMSKYIHPDDELVLEDELQRIKLKGTIDV
SKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPL
DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEG
EQCSAAHVSRVILAGNLLSHLTKKTQAASVEAVKMLDEIL
LQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYS
TLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLE
ILEWTLRVRHISPTAPDTKTDPFIFPECPHVYFCGNTPSF
GSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPI
SFSGFGAE
|
H: |
ADQLYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQML
YDYVERKRKENSGAQLHVTYLVSGSLIQNGHSCHKVAVVR
EDKLEAVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYDI
LKSNLQNCSKFSAIQCAAAVPRA
|
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Description
|
(1) |
DNA polymerase subunit delta-2 (E.C.2.7.7.7), DNA polymerase subunit delta-3
|
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Functional site
|
|
1)
|
chain |
B |
residue |
2 |
type |
MOD_RES |
sequence |
A
|
description |
N-acetylalanine => ECO:0000269|Ref.6, ECO:0007744|PubMed:22223895
|
source |
Swiss-Prot : SWS_FT_FI1
|
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2)
|
chain |
D |
residue |
2 |
type |
MOD_RES |
sequence |
A
|
description |
N-acetylalanine => ECO:0000269|Ref.6, ECO:0007744|PubMed:22223895
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
F |
residue |
2 |
type |
MOD_RES |
sequence |
A
|
description |
N-acetylalanine => ECO:0000269|Ref.6, ECO:0007744|PubMed:22223895
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
4)
|
chain |
H |
residue |
2 |
type |
MOD_RES |
sequence |
A
|
description |
N-acetylalanine => ECO:0000269|Ref.6, ECO:0007744|PubMed:22223895
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
5)
|
chain |
A |
residue |
15 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
6)
|
chain |
C |
residue |
15 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
7)
|
chain |
E |
residue |
15 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
8)
|
chain |
G |
residue |
15 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
|
source |
Swiss-Prot : SWS_FT_FI2
|
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