eF-site ID 3e0j-ABCDEFGH
PDB Code 3e0j
Chain A, B, C, D, E, F, G, H

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Title X-ray structure of the complex of regulatory subunits of human DNA polymerase delta
Classification TRANSFERASE
Compound DNA polymerase subunit delta-2
Source (DPOD3_HUMAN)
Sequence A:  HHHGMFSEQAAQRAHTLLSPPSANNATFARVPVATYTNSS
QPFRLYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPE
EKCCVVGTLFKAMSKYIHPDDELVLEDELQRIKLKGTIDV
SKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPL
DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEG
EQCSAAHVSRVILAGNLLSHLTKKTQAASVEAVKMLDEIL
LQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYS
TLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLE
ILEWTLRVRHISPTAPDTYKTDPFIFPECPHVYFCGNTPS
FGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQP
ISFSGFGAEDDDLGGL
B:  ADQLYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQML
YDYVERKRKENSGAQLHVTYLVSGSLIQNGHSCHKVAVVR
EDKLEAVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYDI
LKSNLQNCSKFSAIQCAAAVPRA
C:  HHHGMFSEQAAQRAHTLLSPPSANNATFARVPVATYTNSS
QPFRLIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQP
EEKCCVVGTLFKAMSKYIHPDDELVLEDELQRIKLKGTID
VSKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPP
LDTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDE
GEQCSAAHVSRVILAGNLLSHLTKKTQAASVEAVKMLDEI
LLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY
STLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHL
EILEWTLRVRHISPTAPDTKTDPFIFPECPHVYFCGNTPS
FGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQP
ISFSGFGAE
D:  ADQLYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQML
YDYVERKRKENSGAQLHVTYLVSGSLIQNGHSCHKVAVVR
EDKLEAVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYDI
LKSNLQNCSKFSAIQCAAAVPRA
E:  HHHGMFSEQAAQRAHTLLSPPSANNATFARVPVATYTNSS
QPFRLYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPE
EKCCVVGTLFKAMSKYIHPDDELVLEDELQRIKLKGTIDV
SKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPL
DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEG
EQCSAAHVSRVILAGNLLSHLTKKTQAASVEAVKMLDEIL
LQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYS
TLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLE
ILEWTLRVRHISPTAPDTKTDPFIFPECPHVYFCGNTPSF
GSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPI
SFSGFGAE
F:  ADQLYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQML
YDYVERKRKENSGAQLHVTYLVSGSLIQNGHSCHKVAVVR
EDKLEAVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYDI
LKSNLQNCSKFSAIQCAAAVPRA
G:  HHHGMFSEQAAQRAHTLLSPPSANNATFARVPVATYTNSS
QPFRLYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPE
EKCCVVGTLFKAMSKYIHPDDELVLEDELQRIKLKGTIDV
SKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPL
DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEG
EQCSAAHVSRVILAGNLLSHLTKKTQAASVEAVKMLDEIL
LQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYS
TLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLE
ILEWTLRVRHISPTAPDTKTDPFIFPECPHVYFCGNTPSF
GSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPI
SFSGFGAE
H:  ADQLYLENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQML
YDYVERKRKENSGAQLHVTYLVSGSLIQNGHSCHKVAVVR
EDKLEAVKSKLAVTASIHVYSIQKAMLKDSGPLFNTDYDI
LKSNLQNCSKFSAIQCAAAVPRA
Description (1)  DNA polymerase subunit delta-2 (E.C.2.7.7.7), DNA polymerase subunit delta-3


Functional site

1) chain B
residue 2
type MOD_RES
sequence A
description N-acetylalanine => ECO:0000269|Ref.6, ECO:0007744|PubMed:22223895
source Swiss-Prot : SWS_FT_FI1

2) chain D
residue 2
type MOD_RES
sequence A
description N-acetylalanine => ECO:0000269|Ref.6, ECO:0007744|PubMed:22223895
source Swiss-Prot : SWS_FT_FI1

3) chain F
residue 2
type MOD_RES
sequence A
description N-acetylalanine => ECO:0000269|Ref.6, ECO:0007744|PubMed:22223895
source Swiss-Prot : SWS_FT_FI1

4) chain H
residue 2
type MOD_RES
sequence A
description N-acetylalanine => ECO:0000269|Ref.6, ECO:0007744|PubMed:22223895
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 15
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI2

6) chain C
residue 15
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI2

7) chain E
residue 15
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI2

8) chain G
residue 15
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI2


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