eF-site ID 3cmm-C
PDB Code 3cmm
Chain C

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Title Crystal Structure of the Uba1-Ubiquitin Complex
Classification LIGASE/PROTEIN BINDING
Compound Ubiquitin-activating enzyme E1 1
Source Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (UBIQ_YEAST)
Sequence C:  AGEIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVE
IAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQK
RGDVTRAKLAELNAYVPVNVLDSLDDVTQLSQFQVVVATD
TVSLEDKVKINEFCHSSGIRFISSETRGLFGNTFVDLGDE
FTVLDPTGEEPRTGMVSDIEPDGTVTMLDDNRHGLEDGNF
VRFSEVEGLDKLNDGTLFKVEVLGPFAFRIGSVKEYGEYK
KGGIFTEVKVPRKISFKSLKQQLSNPEFVFSDFAKFDRAA
QLHLGFQALHQFAVRHNGELPRTMNDEDANELIKLVTDLS
VQQPEVLGEGVDVNEDLIKELSYQARGDIPGVVAFFGGLV
AQEVLKACSGKFTPLKQFMYFDSLESLPDPKNFPRNEKTT
QPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEML
KNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDV
GKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFND
SFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLG
TKGNTQVIIPRLTESYSSSRDPPEKSIPLCTLRSFPNKID
HTIAWAKSLFQGYFTDSAENVNMYLTQPNFVEQTLKQSGD
VKGVLESISDSLSSKPHNFEDCIKWARLEFEKKFNHDIKQ
LLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDIYNNDHFHF
VVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEF
TPNANLKIQVNDDDPGSDEIDQLVSSLPDPSTLAGFKLEP
VDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFI
AGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGF
VNLALPFFGFSEPIASPKGEYNNKKYDKIWDRFDIKGDIK
LSDLIEHFEKDEGLEITMLSYGVSLLYASFFPPKKLKERL
NLPITQLVKLVTKKDIPAHVSTMILEICADDKEGEDVEVP
FITIHL
Description


Functional site

1) chain C
residue 316
type
sequence D
description BINDING SITE FOR RESIDUE PRO C 5129
source : AC2

2) chain C
residue 320
type
sequence N
description BINDING SITE FOR RESIDUE PRO C 5129
source : AC2

3) chain C
residue 323
type
sequence I
description BINDING SITE FOR RESIDUE PRO C 5129
source : AC2

4) chain C
residue 349
type
sequence K
description BINDING SITE FOR RESIDUE PRO C 5129
source : AC2

5) chain C
residue 21
type catalytic
sequence R
description 307
source MCSA : MCSA3

6) chain C
residue 481
type catalytic
sequence R
description 307
source MCSA : MCSA3

7) chain C
residue 544
type catalytic
sequence D
description 307
source MCSA : MCSA3

8) chain C
residue 600
type catalytic
sequence C
description 307
source MCSA : MCSA3

9) chain C
residue 601
type catalytic
sequence T
description 307
source MCSA : MCSA3

10) chain C
residue 603
type catalytic
sequence R
description 307
source MCSA : MCSA3

11) chain C
residue 781
type catalytic
sequence N
description 307
source MCSA : MCSA3

12) chain C
residue 782
type catalytic
sequence D
description 307
source MCSA : MCSA3

13) chain C
residue 600
type catalytic
sequence C
description 939
source MCSA : MCSA4

14) chain C
residue 601
type catalytic
sequence T
description 939
source MCSA : MCSA4

15) chain C
residue 603
type catalytic
sequence R
description 939
source MCSA : MCSA4

16) chain C
residue 781
type catalytic
sequence N
description 939
source MCSA : MCSA4

17) chain C
residue 782
type catalytic
sequence D
description 939
source MCSA : MCSA4

18) chain C
residue 544
type CROSSLNK
sequence D
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214
source Swiss-Prot : SWS_FT_FI2

19) chain C
residue 444
type CROSSLNK
sequence A
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214
source Swiss-Prot : SWS_FT_FI2

20) chain C
residue 470
type CROSSLNK
sequence D
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214
source Swiss-Prot : SWS_FT_FI2

21) chain C
residue 481
type CROSSLNK
sequence R
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214
source Swiss-Prot : SWS_FT_FI2

22) chain C
residue 494
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214
source Swiss-Prot : SWS_FT_FI2

23) chain C
residue 914
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI4

24) chain C
residue 595
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
source Swiss-Prot : SWS_FT_FI5

25) chain C
residue 608
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
source Swiss-Prot : SWS_FT_FI5


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