eF-site ID 3c6w-ABCD
PDB Code 3c6w
Chain A, B, C, D

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Title Crystal structure of the ING5 PHD finger in complex with H3K4me3 peptide
Classification METAL BINDING PROTEIN
Compound Inhibitor of growth protein 5
Source Homo sapiens (Human) (3C6W)
Sequence A:  EPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPK
GKWFCPRCVQE
B:  ARTXQTA
C:  NEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKP
KGKWFCPRCVQE
D:  ARTXQTARKST
Description (1)  Inhibitor of growth protein 5


Functional site

1) chain A
residue 189
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1
source : AC1

2) chain A
residue 191
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1
source : AC1

3) chain A
residue 213
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1
source : AC1

4) chain A
residue 216
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1
source : AC1

5) chain A
residue 202
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2
source : AC2

6) chain A
residue 207
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2
source : AC2

7) chain A
residue 229
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2
source : AC2

8) chain A
residue 232
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2
source : AC2

9) chain C
residue 189
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 3
source : AC3

10) chain C
residue 191
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 3
source : AC3

11) chain C
residue 213
type
sequence H
description BINDING SITE FOR RESIDUE ZN C 3
source : AC3

12) chain C
residue 216
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 3
source : AC3

13) chain C
residue 202
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 4
source : AC4

14) chain C
residue 207
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 4
source : AC4

15) chain C
residue 229
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 4
source : AC4

16) chain C
residue 232
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 4
source : AC4

17) chain A
residue 186-235
type ZN_FING
sequence PTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKG
KWFCPRCVQE
description PHD-type => ECO:0000255|PROSITE-ProRule:PRU00146
source Swiss-Prot : SWS_FT_FI1

18) chain C
residue 186-235
type ZN_FING
sequence PTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKG
KWFCPRCVQE
description PHD-type => ECO:0000255|PROSITE-ProRule:PRU00146
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 189
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 191
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

21) chain A
residue 202
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

22) chain C
residue 191
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

23) chain C
residue 202
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

24) chain C
residue 207
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

25) chain C
residue 213
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

26) chain C
residue 216
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

27) chain C
residue 229
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

28) chain C
residue 232
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

29) chain A
residue 229
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

30) chain A
residue 232
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

31) chain C
residue 189
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

32) chain A
residue 207
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

33) chain A
residue 213
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

34) chain A
residue 216
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI2

35) chain A
residue 188
type SITE
sequence Y
description Histone H3K4me3 binding => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI3

36) chain A
residue 199
type SITE
sequence M
description Histone H3K4me3 binding => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI3

37) chain A
residue 203
type SITE
sequence D
description Histone H3K4me3 binding => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI3

38) chain A
residue 211
type SITE
sequence W
description Histone H3K4me3 binding => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI3

39) chain C
residue 188
type SITE
sequence Y
description Histone H3K4me3 binding => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI3

40) chain C
residue 199
type SITE
sequence M
description Histone H3K4me3 binding => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI3

41) chain C
residue 203
type SITE
sequence D
description Histone H3K4me3 binding => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI3

42) chain C
residue 211
type SITE
sequence W
description Histone H3K4me3 binding => ECO:0000269|PubMed:18623064, ECO:0007744|PDB:3C6W
source Swiss-Prot : SWS_FT_FI3

43) chain A
residue 189-232
type prosite
sequence CLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWF
CPRC
description ZF_PHD_1 Zinc finger PHD-type signature. Cl.Chqvsygem.....................................IgCdnpdCpiewFHfaCvdlttkpkgk...................................WfCprC
source prosite : PS01359


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