eF-site ID 3c5c-ABCD
PDB Code 3c5c
Chain A, B, C, D

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Title Crystal structure of human Ras-like, family 12 protein in complex with GDP
Classification SIGNALING PROTEIN
Compound RAS-like protein 12
Source (Q9NYN1_HUMAN)
Sequence A:  LEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYS
SEETVDHQPVHLRVMDTADPRNCERYLNWAHAFLVVYSVD
SRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQY
RQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVR
EARR
B:  LEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYS
SEETVDHQPVHLRVMDTADLDTPRNCERYLNWAHAFLVVY
SVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDM
AQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHE
AVREARR
C:  GPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDT
YSSEETVDHQPVHLRVMDTADLPRNCERYLNWAHAFLVVY
SVDSRQSFDSSSSYLELLALHAKETQPALLLGNKLDMAQY
RQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVR
EARR
D:  LEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYS
SEETVDHQPVHLRVMDTADLRNCERYLNWAHAFLVVYSVD
SRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQY
RQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVR
EARR
Description


Functional site

1) chain A
residue 34
type
sequence S
description BINDING SITE FOR RESIDUE MG A 202
source : AC1

2) chain A
residue 55
type
sequence D
description BINDING SITE FOR RESIDUE MG A 203
source : AC2

3) chain B
residue 34
type
sequence S
description BINDING SITE FOR RESIDUE MG B 202
source : AC3

4) chain B
residue 55
type
sequence D
description BINDING SITE FOR RESIDUE MG B 203
source : AC4

5) chain C
residue 34
type
sequence S
description BINDING SITE FOR RESIDUE MG C 202
source : AC5

6) chain C
residue 55
type
sequence D
description BINDING SITE FOR RESIDUE MG C 203
source : AC6

7) chain D
residue 34
type
sequence S
description BINDING SITE FOR RESIDUE MG D 202
source : AC7

8) chain A
residue 29
type
sequence R
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

9) chain A
residue 30
type
sequence G
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

10) chain A
residue 31
type
sequence A
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

11) chain A
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

12) chain A
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

13) chain A
residue 34
type
sequence S
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

14) chain A
residue 35
type
sequence A
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

15) chain A
residue 47
type
sequence S
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

16) chain A
residue 134
type
sequence N
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

17) chain A
residue 135
type
sequence K
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

18) chain A
residue 137
type
sequence D
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

19) chain A
residue 138
type
sequence M
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

20) chain A
residue 164
type
sequence S
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

21) chain A
residue 165
type
sequence A
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

22) chain A
residue 166
type
sequence C
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

23) chain B
residue 89
type
sequence N
description BINDING SITE FOR RESIDUE GDP A 201
source : AC8

24) chain A
residue 142
type
sequence R
description BINDING SITE FOR RESIDUE UNX A 204
source : AC9

25) chain A
residue 145
type
sequence T
description BINDING SITE FOR RESIDUE UNX A 204
source : AC9

26) chain A
residue 146
type
sequence K
description BINDING SITE FOR RESIDUE UNX A 204
source : AC9

27) chain B
residue 28
type
sequence R
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

28) chain B
residue 30
type
sequence G
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

29) chain B
residue 31
type
sequence A
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

30) chain B
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

31) chain B
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

32) chain B
residue 34
type
sequence S
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

33) chain B
residue 35
type
sequence A
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

34) chain B
residue 47
type
sequence S
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

35) chain B
residue 134
type
sequence N
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

36) chain B
residue 135
type
sequence K
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

37) chain B
residue 137
type
sequence D
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

38) chain B
residue 138
type
sequence M
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

39) chain B
residue 164
type
sequence S
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

40) chain B
residue 165
type
sequence A
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

41) chain B
residue 166
type
sequence C
description BINDING SITE FOR RESIDUE GDP B 201
source : BC1

42) chain C
residue 29
type
sequence R
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

43) chain C
residue 30
type
sequence G
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

44) chain C
residue 31
type
sequence A
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

45) chain C
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

46) chain C
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

47) chain C
residue 34
type
sequence S
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

48) chain C
residue 35
type
sequence A
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

49) chain C
residue 47
type
sequence S
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

50) chain C
residue 134
type
sequence N
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

51) chain C
residue 135
type
sequence K
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

52) chain C
residue 137
type
sequence D
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

53) chain C
residue 138
type
sequence M
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

54) chain C
residue 164
type
sequence S
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

55) chain C
residue 165
type
sequence A
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

56) chain C
residue 166
type
sequence C
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

57) chain D
residue 89
type
sequence N
description BINDING SITE FOR RESIDUE GDP C 201
source : BC2

58) chain C
residue 44
type
sequence R
description BINDING SITE FOR RESIDUE UNX C 204
source : BC3

59) chain C
residue 45
type
sequence F
description BINDING SITE FOR RESIDUE UNX C 204
source : BC3

60) chain B
residue 44
type
sequence R
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

61) chain D
residue 28
type
sequence R
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

62) chain D
residue 29
type
sequence R
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

63) chain D
residue 30
type
sequence G
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

64) chain D
residue 31
type
sequence A
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

65) chain D
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

66) chain D
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

67) chain D
residue 34
type
sequence S
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

68) chain D
residue 35
type
sequence A
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

69) chain D
residue 45
type
sequence F
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

70) chain D
residue 47
type
sequence S
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

71) chain D
residue 134
type
sequence N
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

72) chain D
residue 135
type
sequence K
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

73) chain D
residue 137
type
sequence D
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

74) chain D
residue 138
type
sequence M
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

75) chain D
residue 164
type
sequence S
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

76) chain D
residue 165
type
sequence A
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

77) chain D
residue 166
type
sequence C
description BINDING SITE FOR RESIDUE GDP D 201
source : BC4

78) chain D
residue 55
type
sequence D
description BINDING SITE FOR RESIDUE UNX D 203
source : BC5

79) chain D
residue 156
type
sequence F
description BINDING SITE FOR RESIDUE UNX D 203
source : BC5

80) chain A
residue 74
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

81) chain B
residue 74
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

82) chain C
residue 74
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

83) chain D
residue 74
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

84) chain A
residue 27
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI1

85) chain A
residue 134
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

86) chain B
residue 27
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI1

87) chain B
residue 134
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

88) chain C
residue 27
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI1

89) chain C
residue 134
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

90) chain D
residue 27
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI1

91) chain D
residue 134
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1


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