eF-site ID 3by4-A
PDB Code 3by4
Chain A

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Title Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin
Classification CELL CYCLE, HYDROLASE
Compound Ubiquitin thioesterase OTU1
Source Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (UBIQ_HUMAN)
Sequence A:  RVLKSTEMSIGGSGENVLSVHPVLDDNSCLFHAIAYGIFK
QDSVRDLREMVSKEVLNNPVKFNDAILDKPNKDYAQWILK
MESWGGAIEIGIISDALAVAIYVVDIDAVKIEKFNEDKFD
NYILILFNGIHYDSLTMNEFKTVFNKNQPESDDVLTAALQ
LASNLKQTGYSF
Description (1)  Ubiquitin thioesterase OTU1 (E.C.3.4.19.12)/Ubiquitin


Functional site

1) chain A
residue 117
type
sequence D
description BINDING SITE FOR RESIDUE 3CN B 77
source : AC1

2) chain A
residue 118
type
sequence N
description BINDING SITE FOR RESIDUE 3CN B 77
source : AC1

3) chain A
residue 120
type
sequence C
description BINDING SITE FOR RESIDUE 3CN B 77
source : AC1

4) chain A
residue 175
type
sequence W
description BINDING SITE FOR RESIDUE 3CN B 77
source : AC1

5) chain A
residue 221
type
sequence I
description BINDING SITE FOR RESIDUE 3CN B 77
source : AC1

6) chain A
residue 222
type
sequence H
description BINDING SITE FOR RESIDUE 3CN B 77
source : AC1

7) chain A
residue 160
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:18719106
source Swiss-Prot : SWS_FT_FI6


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