eF-site ID 3bo0-ABC PDB Code 3bo0 Chain A, B, C click to enlarge Title Ribosome-SecY complex Classification RIBOSOME Compound 23S RIBOSOMAL RNA Source ORGANISM_SCIENTIFIC: Escherichia coli; Sequence A:  KKLIPILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMG CIDVYTAGAQIPAIFEFWQTITASRIGTLITLGIGPIVTA GIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFV EAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIV SKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLI QGVPNIEYIAPIIGTIIVFLMVVYAECMRRRIVVNYAKRQ QGRRVYAAQSTHLPLKVVYVSNIPVILAAALFANIQLWGL ALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPI HAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIKKSGA FVPGIRPGEQTAKYIEHRLKRYIPPLTVMSSAFVGFLATI ANFIGALGGGTGVLLTVSIVYRMYEQLLREKVSELHPAIA KL B:  TKGKATVAFAREARTEVRKVIWPTRKPTKDEYLAVAKVTA LGISLLGIIGYIIHVPATYIKGILK C:  ETFSKIRVKPEHVIGVTVAFVIIEAILTYGRF Description Functional site 1) chain A residue 47-55 type TOPO_DOM sequence TAGAQIPAI description Extracellular source Swiss-Prot : SWS_FT_FI2 2) chain A residue 130-140 type TOPO_DOM sequence GAFGILTPLLA description Extracellular source Swiss-Prot : SWS_FT_FI2 3) chain A residue 192-209 type TOPO_DOM sequence YLWKFLNSLIQGVPNIEY description Extracellular source Swiss-Prot : SWS_FT_FI2 4) chain A residue 285-319 type TOPO_DOM sequence RMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISD description Extracellular source Swiss-Prot : SWS_FT_FI2 5) chain A residue 408 type TOPO_DOM sequence L description Extracellular source Swiss-Prot : SWS_FT_FI2 6) chain A residue 56-88 type TRANSMEM sequence FEFWQTITASRIGTLITLGIGPIVTAGIIMQLL description Discontinuously helical; Name=Helix 2 source Swiss-Prot : SWS_FT_FI3 7) chain A residue 56-63 type INTRAMEM sequence FEFWQTIT description Helical; Name=Helix 2A source Swiss-Prot : SWS_FT_FI4 8) chain A residue 64-69 type INTRAMEM sequence ASRIGT description source Swiss-Prot : SWS_FT_FI5 9) chain A residue 70-88 type INTRAMEM sequence LITLGIGPIVTAGIIMQLL description Helical; Name=Helix 2B source Swiss-Prot : SWS_FT_FI6 10) chain A residue 89-110 type TOPO_DOM sequence VGSGIIQMDLSIPENRALFQGC description Cytoplasmic source Swiss-Prot : SWS_FT_FI7 11) chain A residue 162-168 type TOPO_DOM sequence SKYGIGS description Cytoplasmic source Swiss-Prot : SWS_FT_FI7 12) chain A residue 111-129 type TRANSMEM sequence QKLLSIIMCFVEAVLFVGA description Helical; Name=Helix 3 source Swiss-Prot : SWS_FT_FI8 13) chain A residue 141-161 type TRANSMEM sequence FLVIIQIAFGSIILIYLDEIV description Helical; Name=Helix 4 source Swiss-Prot : SWS_FT_FI9 14) chain A residue 169-191 type TRANSMEM sequence GIGLFIAAGVSQTIFVGALGPEG description Helical; Name=Helix 5 source Swiss-Prot : SWS_FT_FI10 15) chain A residue 210-227 type TRANSMEM sequence IAPIIGTIIVFLMVVYAE description Helical; Name=Helix 6 source Swiss-Prot : SWS_FT_FI11 16) chain A residue 263-284 type TRANSMEM sequence NIPVILAAALFANIQLWGLALY description Helical; Name=Helix 7 source Swiss-Prot : SWS_FT_FI12 17) chain A residue 320-338 type TRANSMEM sequence PIHAIVYMIAMIITCVMFG description Helical; Name=Helix 8 source Swiss-Prot : SWS_FT_FI13 18) chain A residue 393-407 type TRANSMEM sequence AFVGFLATIANFIGA description Helical; Name=Helix 9 source Swiss-Prot : SWS_FT_FI14 19) chain A residue 409-422 type TRANSMEM sequence GGGTGVLLTVSIVY description Helical; Name=Helix 10 source Swiss-Prot : SWS_FT_FI15 20) chain A residue 75 type SITE sequence I description Pore ring source Swiss-Prot : SWS_FT_FI16 21) chain A residue 79 type SITE sequence V description Pore ring source Swiss-Prot : SWS_FT_FI16 22) chain A residue 174 type SITE sequence I description Pore ring source Swiss-Prot : SWS_FT_FI16 23) chain A residue 179 type SITE sequence S description Pore ring source Swiss-Prot : SWS_FT_FI16 24) chain A residue 267 type SITE sequence I description Pore ring source Swiss-Prot : SWS_FT_FI16 25) chain A residue 416 type SITE sequence L description Pore ring source Swiss-Prot : SWS_FT_FI16 26) chain A residue 405-412 type prosite sequence IGALGGGT description HMG_COA_REDUCTASE_2 Hydroxymethylglutaryl-coenzyme A reductases signature 2. IGaLGGGT source prosite : PS00318 27) chain A residue 69-88 type prosite sequence TLITLGIGPIVTAGIIMQLL description SECY_1 Protein secY signature 1. TLItLGIgPIVtAGIIMQLL source prosite : PS00755 28) chain A residue 156-173 type prosite sequence YLDEIVSKYGIGSGIGLF description SECY_2 Protein secY signature 2. YLdEiVSky.GIGSGiGLF source prosite : PS00756 29) chain C residue 31-49 type TRANSMEM sequence EHVIGVTVAFVIIEAILTY description Helical source Swiss-Prot : SWS_FT_FI1

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