eF-site ID 3bez-ABCD
PDB Code 3bez
Chain A, B, C, D

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Title Crystal structure of Escherichia coli Signal peptide peptidase (SppA), SeMet crystals
Classification HYDROLASE
Compound Protease 4
Source Escherichia coli (strain K12) (SPPA_ECOLI)
Sequence A:  RGALLLDISGVIVDKPQENSLFDIVNTIRQAKDDRNITGI
VXDLKNFAGGDQPSXQYIGKALKEFRDSGKPVYAVGENYS
QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKL
KVSTHVFRVGTYKSAVEPFIRDDXSPAAREADSRWIGELW
QNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYA
LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDY
ALKTPADTGDSIGVVFANGAIXDGEETQGNVGGDTTAAQI
RDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAG
KPVVVSXGGXAASGGYWISTPANYIVANPSTLTGSIGIFG
VITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLX
XQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQD
AKANGLVDSLGDFDDAVAKAAELAKVKQWHLEY
B:  RGALLLDISGVIVDKPQENSLFDIVNTIRQAKDDRNITGI
VXDLKNFAGGDQPSXQYIGKALKEFRDSGKPVYAVGENYS
QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKL
KVSTHVFRVGTYKSAVEPFIRDDXSPAAREADSRWIGELW
QNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYA
LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDY
ALKTPADTGDSIGVVFANGAIXDGEETQGNVGGDTTAAQI
RDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAG
KPVVVSXGGXAASGGYWISTPANYIVANPSTLTGSIGIFG
VITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLX
XQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQD
AKANGLVDSLGDFDDAVAKAAELAKVKQWHLEY
C:  SRGALLLDISGVIVDKPQENSLFDIVNTIRQAKDDRNITG
IVXDLKNFAGGDQPSXQYIGKALKEFRDSGKPVYAVGENY
SQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDK
LKVSTHVFRVGTYKSAVEPFIRDDXSPAAREADSRWIGEL
WQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKY
ALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD
YALKTPADTGDSIGVVFANGAIXDGEETQGNVGGDTTAAQ
IRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAA
GKPVVVSXGGXAASGGYWISTPANYIVANPSTLTGSIGIF
GVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQL
XXQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQ
DAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYV
D:  ASRGALLLDISGVIVDKPDSQENSLFDIVNTIRQAKDDRN
ITGIVXDLKNFAGGDQPSXQYIGKALKEFRDSGKPVYAVG
ENYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSL
LDKLKVSTHVFRVGTYKSAVEPFIRDDXSPAAREADSRWI
GELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDT
AKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAIS
YYDYALKTPADTGDSIGVVFANGAIXDGEETQGNVGGDTT
AAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA
RAAGKPVVVSXGGXAASGGYWISTPANYIVANPSTLTGSI
GIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPE
AQLXXQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVW
TGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYV
Description (1)  Crystal structure of Escherichia coli Signal peptide peptidase (SppA), SeMet crystals


Functional site

1) chain A
residue 209
type ACT_SITE
sequence K
description Proton donor/acceptor => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

2) chain B
residue 209
type ACT_SITE
sequence K
description Proton donor/acceptor => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

3) chain C
residue 209
type ACT_SITE
sequence K
description Proton donor/acceptor => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

4) chain D
residue 209
type ACT_SITE
sequence K
description Proton donor/acceptor => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 409
type ACT_SITE
sequence S
description Nucleophile
source Swiss-Prot : SWS_FT_FI2

6) chain B
residue 409
type ACT_SITE
sequence S
description Nucleophile
source Swiss-Prot : SWS_FT_FI2

7) chain C
residue 409
type ACT_SITE
sequence S
description Nucleophile
source Swiss-Prot : SWS_FT_FI2

8) chain D
residue 409
type ACT_SITE
sequence S
description Nucleophile
source Swiss-Prot : SWS_FT_FI2


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