eF-site ID 3b3q-ABEF
PDB Code 3b3q
Chain A, B, E, F

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Title Crystal structure of a synaptic adhesion complex
Classification CELL ADHESION
Compound Nlgn1 protein
Source (A4FVB9_HUMAN)
Sequence A:  DPLVTTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTG
EHRFQPPEPPSPWSDIRNATQFAPVCPQNIIDGRLPEVML
PVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDGGPKPVM
VYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLG
FLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRIT
VFGSGAGGSCVNLLTLSHYSEGLFQRAIAQSGTALSSWAV
SFQPAKYARILATKVGCQVSDTVELVECLQKKPYKELVDQ
DVQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIML
GVNQGEGLKFVENIVDSDDGVSASDFDFAVSNFVDNLYGY
DVLRETIKFMYTDWADRHNPETRRKTLLALFTDHQWVAPA
VATADLHSNFGSPTYFYAFYHHCQTDQVPAWADAAHGDEV
PYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKT
GDPNQPVPQDFEEVAWTRYSQKDQLYLHIGLKPRVKEHYR
ANKVNLWLELVPHLHN
B:  DPLVTTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTG
EHRFQPPEPPSPWSDIRNATQFAPVCPQNIIDGRLPEVML
PVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDGGPKPVM
VYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLG
FLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRIT
VFGSGAGGSCVNLLTLSHYSEGLFQRAIAQSGTALSSWAV
SFQPAKYARILATKVGCQVSDTVELVECLQKKPYKELVDQ
DVQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIML
GVNQGEGLKFVENIVDSDDGVSASDFDFAVSNFVDNLYGY
DVLRETIKFMYTDWADRHNPETRRKTLLALFTDHQWVAPA
VATADLHSNFGSPTYFYAFYHHCQTDQVPAWADAAHGDEV
PYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKT
GDPNQPVPQDFEEVAWTRYSQKDQLYLHIGLKPRVKEHYR
ANKVNLWLELVPHLHN
E:  HSAFAADPGHTTYIFSKGGGQITYKWPPNDRPSTRADRLA
IGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNV
GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPV
IERYPAGRQLTIFNSQATIIIGGKEQGQPFQGQLSGLYYN
GLKVLNMAAENDANIAIVGNVRLVGEV
F:  HSAFAADPGHTTYIFSKGGGQITYKWPPNDRPSTRADRLA
IGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNV
GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPV
IERYPAGRQLTIFNSQATIIIGGKEQGQPFQGQLSGLYYN
GLKVLNMAAENDANIAIVGNVRLVGEV
Description


Functional site

1) chain E
residue 184
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

2) chain F
residue 184
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

3) chain B
residue 332
type CARBOHYD
sequence Y
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

4) chain B
residue 372
type CARBOHYD
sequence Y
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

5) chain A
residue 576
type CARBOHYD
sequence V
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI3

6) chain B
residue 576
type CARBOHYD
sequence V
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI3

7) chain E
residue 137
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI1

8) chain E
residue 154
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI1

9) chain E
residue 266
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI1

10) chain E
residue 268
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI1

11) chain F
residue 137
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI1

12) chain F
residue 154
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI1

13) chain F
residue 266
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI1

14) chain F
residue 268
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:18084303
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 151-161
type prosite
sequence EDCLYLNIYVP
description CARBOXYLESTERASE_B_2 Carboxylesterases type-B signature 2. EDCLYLNIYvP
source prosite : PS00941


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