eF-site ID 3avr-A
PDB Code 3avr
Chain A

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Title Catalytic fragment of UTX/KDM6A bound with histone H3K27me3 peptide, N-oxyalylglycine, and Ni(II)
Classification OXIDOREDUCTASE/STRUCTURAL PROTEIN
Compound Lysine-specific demethylase 6A
Source null (3AVR)
Sequence A:  SVSIYPSSAEVLKACRNNSSILLDKCPPPRPPSSPYPPLP
KDKLNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTVIRG
LAGALKLDLGLFSTKTLVEANNEHMVEVRTQLLQPADENW
DPTGTKKIWHCESNRSHTTIAKYAQYQASSFQESLPFKTI
KFGTNIDLSDDKKWKLQLHELTKLPAFVRVVSAGNLLSHV
GHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPG
DCEWFVVPEGYWGVLNDFCEKNNLNFLMGSWWPNLEDLYE
ANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVG
PLTACQYKLAVERYEWNKLQSVKSIVPMVHLSWNMARNIK
VSDPKLFEMIKYCLLRTLKQCQTLREALIAAGKEIIWHGR
TKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCA
RKTSGNLENFVVLEQYKMEDLMQVYDQFTLAPP
Description


Functional site

1) chain A
residue 1137
type
sequence K
description BINDING SITE FOR RESIDUE OGA A 1501
source : AC1

2) chain A
residue 1143
type
sequence T
description BINDING SITE FOR RESIDUE OGA A 1501
source : AC1

3) chain A
residue 1146
type
sequence H
description BINDING SITE FOR RESIDUE OGA A 1501
source : AC1

4) chain A
residue 1148
type
sequence E
description BINDING SITE FOR RESIDUE OGA A 1501
source : AC1

5) chain A
residue 1154
type
sequence S
description BINDING SITE FOR RESIDUE OGA A 1501
source : AC1

6) chain A
residue 1156
type
sequence N
description BINDING SITE FOR RESIDUE OGA A 1501
source : AC1

7) chain A
residue 1166
type
sequence W
description BINDING SITE FOR RESIDUE OGA A 1501
source : AC1

8) chain A
residue 1226
type
sequence H
description BINDING SITE FOR RESIDUE OGA A 1501
source : AC1

9) chain A
residue 1238
type
sequence A
description BINDING SITE FOR RESIDUE OGA A 1501
source : AC1

10) chain A
residue 1331
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1502
source : AC2

11) chain A
residue 1334
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1502
source : AC2

12) chain A
residue 1358
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1502
source : AC2

13) chain A
residue 1361
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1502
source : AC2

14) chain A
residue 1146
type
sequence H
description BINDING SITE FOR RESIDUE NI A 1503
source : AC3

15) chain A
residue 1148
type
sequence E
description BINDING SITE FOR RESIDUE NI A 1503
source : AC3

16) chain A
residue 1226
type
sequence H
description BINDING SITE FOR RESIDUE NI A 1503
source : AC3

17) chain A
residue 1120
type
sequence S
description BINDING SITE FOR RESIDUE EDO A 1
source : AC4

18) chain A
residue 946
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 2
source : AC5

19) chain A
residue 1291
type
sequence M
description BINDING SITE FOR RESIDUE EDO A 2
source : AC5

20) chain A
residue 932
type
sequence P
description BINDING SITE FOR RESIDUE EDO A 3
source : AC6

21) chain A
residue 933
type
sequence K
description BINDING SITE FOR RESIDUE EDO A 3
source : AC6

22) chain A
residue 1204
type
sequence N
description BINDING SITE FOR RESIDUE EDO A 3
source : AC6

23) chain A
residue 889
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 4
source : AC7

24) chain A
residue 890
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 4
source : AC7

25) chain A
residue 891
type
sequence P
description BINDING SITE FOR RESIDUE EDO A 4
source : AC7

26) chain A
residue 940
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 4
source : AC7

27) chain A
residue 1039
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 5
source : AC8

28) chain A
residue 1040
type
sequence A
description BINDING SITE FOR RESIDUE EDO A 5
source : AC8

29) chain A
residue 1233
type
sequence W
description BINDING SITE FOR RESIDUE EDO A 5
source : AC8

30) chain A
residue 1030
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 6
source : AC9

31) chain A
residue 1034
type
sequence K
description BINDING SITE FOR RESIDUE EDO A 6
source : AC9

32) chain A
residue 1035
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 6
source : AC9

33) chain A
residue 1083
type
sequence K
description BINDING SITE FOR RESIDUE EDO A 6
source : AC9

34) chain A
residue 1108
type
sequence A
description BINDING SITE FOR RESIDUE EDO A 7
source : BC1

35) chain A
residue 1111
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 7
source : BC1

36) chain A
residue 961
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 8
source : BC2

37) chain A
residue 1221
type
sequence N
description BINDING SITE FOR RESIDUE EDO A 8
source : BC2

38) chain A
residue 1222
type
sequence A
description BINDING SITE FOR RESIDUE EDO A 8
source : BC2

39) chain A
residue 1245
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 8
source : BC2

40) chain A
residue 1247
type
sequence C
description BINDING SITE FOR RESIDUE EDO A 8
source : BC2

41) chain A
residue 981
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 9
source : BC3

42) chain A
residue 982
type
sequence G
description BINDING SITE FOR RESIDUE EDO A 9
source : BC3

43) chain A
residue 1159
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 9
source : BC3

44) chain A
residue 1322
type
sequence R
description BINDING SITE FOR RESIDUE CL A 1402
source : BC4

45) chain A
residue 1114
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1403
source : BC5

46) chain A
residue 1115
type
sequence A
description BINDING SITE FOR RESIDUE CL A 1403
source : BC5

47) chain A
residue 1148
type MOD_RES
sequence E
description Citrulline; alternate => ECO:0000269|PubMed:15345777, ECO:0000269|PubMed:16497732, ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

48) chain A
residue 1226
type MOD_RES
sequence H
description Citrulline; alternate => ECO:0000269|PubMed:15345777, ECO:0000269|PubMed:16497732, ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

49) chain A
residue 1331
type MOD_RES
sequence C
description Citrulline; alternate => ECO:0000269|PubMed:15345777, ECO:0000269|PubMed:16497732, ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

50) chain A
residue 1334
type MOD_RES
sequence C
description Citrulline; alternate => ECO:0000269|PubMed:15345777, ECO:0000269|PubMed:16497732, ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

51) chain A
residue 1358
type MOD_RES
sequence C
description Citrulline; alternate => ECO:0000269|PubMed:15345777, ECO:0000269|PubMed:16497732, ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

52) chain A
residue 1361
type MOD_RES
sequence C
description Citrulline; alternate => ECO:0000269|PubMed:15345777, ECO:0000269|PubMed:16497732, ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1


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