eF-site ID 3a9c-F PDB Code 3a9c Chain F click to enlarge Title Crystal structure of ribose-1,5-bisphosphate isomerase from Thermococcus kodakaraensis KOD1 in complex with ribulose-1,5-bisphosphate Classification ISOMERASE Compound Translation initiation factor eIF-2B, delta subunit Source Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) (Q5JFM9_PYRKO) Sequence F:  MAVVKEVLEIAEKIKNMEIRGAGKIARSAAYALQLQAEKS KATNVDEFWKEMKQAAKILFETRPTAVSLPNALRYVMHRG KIAYSSGADLEQLRFVIINAAKEFIHNSEKALERIGEFGA KRIEDGDVIMTHXHSKAAISVMKTAWEQGKDIKVIVTETR PKWQGKITAKELASYGIPVIYVVDSAARHYMKMTDKVVMG ADSITVNGAVINKIGTALIALTAKEHRVWTMIAAETYKFH PETMLGQLVEIEMRDPTEVIPEDELKTWPKNIEVWNPAFD VTPPEYVDVIITERGIIPPYAAIDILREEFGWALKYTEPW ED Description Functional site 1) chain F residue 133 type sequence X description BINDING SITE FOR RESIDUE RUB F 401 source : BC4 2) chain F residue 135 type sequence S description BINDING SITE FOR RESIDUE RUB F 401 source : BC4 3) chain F residue 136 type sequence K description BINDING SITE FOR RESIDUE RUB F 401 source : BC4 4) chain F residue 137 type sequence A description BINDING SITE FOR RESIDUE RUB F 401 source : BC4 5) chain F residue 162 type sequence K description BINDING SITE FOR RESIDUE RUB F 401 source : BC4 6) chain F residue 212 type sequence N description BINDING SITE FOR RESIDUE RUB F 401 source : BC4 7) chain F residue 213 type sequence K description BINDING SITE FOR RESIDUE RUB F 401 source : BC4 8) chain F residue 238 type sequence K description BINDING SITE FOR RESIDUE RUB F 401 source : BC4 9) chain F residue 254 type sequence R description BINDING SITE FOR RESIDUE RUB F 401 source : BC4 10) chain F residue 224 type sequence K description BINDING SITE FOR RESIDUE PEG F 402 source : BC5 11) chain F residue 227 type sequence R description BINDING SITE FOR RESIDUE PEG F 402 source : BC5 12) chain F residue 228 type sequence V description BINDING SITE FOR RESIDUE PEG F 402 source : BC5 13) chain F residue 230 type sequence T description BINDING SITE FOR RESIDUE PEG F 402 source : BC5 14) chain F residue 288 type sequence D description BINDING SITE FOR RESIDUE PEG F 402 source : BC5 15) chain F residue 227 type SITE sequence R description Plays a key role in hexamerization source Swiss-Prot : SWS_FT_FI5 16) chain F residue 63 type BINDING sequence R description BINDING => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI4 17) chain F residue 238 type BINDING sequence K description BINDING => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI4 18) chain F residue 133 type ACT_SITE sequence X description Proton acceptor => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI1 19) chain F residue 202 type ACT_SITE sequence D description Proton donor => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI2 20) chain F residue 20 type BINDING sequence R description BINDING => ECO:0000255|HAMAP-Rule:MF_02230 source Swiss-Prot : SWS_FT_FI3 21) chain F residue 135 type BINDING sequence S description BINDING => ECO:0000255|HAMAP-Rule:MF_02230 source Swiss-Prot : SWS_FT_FI3 22) chain F residue 212 type BINDING sequence N description BINDING => ECO:0000255|HAMAP-Rule:MF_02230 source Swiss-Prot : SWS_FT_FI3

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