eF-site ID 3a9c-C PDB Code 3a9c Chain C click to enlarge Title Crystal structure of ribose-1,5-bisphosphate isomerase from Thermococcus kodakaraensis KOD1 in complex with ribulose-1,5-bisphosphate Classification ISOMERASE Compound Translation initiation factor eIF-2B, delta subunit Source Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) (Q5JFM9_PYRKO) Sequence C:  AVVKEVLEIAEKIKNMEIRGAGKIARSAAYALQLQAEKSK ATNVDEFWKEMKQAAKILFETRPTAVSLPNALRYVMHRGK IAYSSGADLEQLRFVIINAAKEFIHNSEKALERIGEFGAK RIEDGDVIMTHXHSKAAISVMKTAWEQGKDIKVIVTETRP KWQGKITAKELASYGIPVIYVVDSAARHYMKMTDKVVMGA DSITVNGAVINKIGTALIALTAKEHRVWTMIAAETYKFHP ETMLGQLVEIEMRDPTEVIPEDELKTWPKNIEVWNPAFDV TPPEYVDVIITERGIIPPYAAIDILREEFGWALKYTEPWE D Description Functional site 1) chain C residue 133 type sequence X description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 2) chain C residue 135 type sequence S description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 3) chain C residue 136 type sequence K description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 4) chain C residue 137 type sequence A description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 5) chain C residue 164 type sequence Q description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 6) chain C residue 201 type sequence A description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 7) chain C residue 212 type sequence N description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 8) chain C residue 213 type sequence K description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 9) chain C residue 238 type sequence K description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 10) chain C residue 254 type sequence R description BINDING SITE FOR RESIDUE RUB C 401 source : AC7 11) chain C residue 224 type sequence K description BINDING SITE FOR RESIDUE PEG C 402 source : AC8 12) chain C residue 228 type sequence V description BINDING SITE FOR RESIDUE PEG C 402 source : AC8 13) chain C residue 285 type sequence E description BINDING SITE FOR RESIDUE PEG C 402 source : AC8 14) chain C residue 286 type sequence Y description BINDING SITE FOR RESIDUE PEG C 402 source : AC8 15) chain C residue 288 type sequence D description BINDING SITE FOR RESIDUE PEG C 402 source : AC8 16) chain C residue 227 type SITE sequence R description Plays a key role in hexamerization source Swiss-Prot : SWS_FT_FI5 17) chain C residue 63 type BINDING sequence R description BINDING => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI4 18) chain C residue 238 type BINDING sequence K description BINDING => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI4 19) chain C residue 133 type ACT_SITE sequence X description Proton acceptor => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI1 20) chain C residue 202 type ACT_SITE sequence D description Proton donor => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI2 21) chain C residue 20 type BINDING sequence R description BINDING => ECO:0000255|HAMAP-Rule:MF_02230 source Swiss-Prot : SWS_FT_FI3 22) chain C residue 135 type BINDING sequence S description BINDING => ECO:0000255|HAMAP-Rule:MF_02230 source Swiss-Prot : SWS_FT_FI3 23) chain C residue 212 type BINDING sequence N description BINDING => ECO:0000255|HAMAP-Rule:MF_02230 source Swiss-Prot : SWS_FT_FI3

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