eF-site ID 3a9c-A PDB Code 3a9c Chain A click to enlarge Title Crystal structure of ribose-1,5-bisphosphate isomerase from Thermococcus kodakaraensis KOD1 in complex with ribulose-1,5-bisphosphate Classification ISOMERASE Compound Translation initiation factor eIF-2B, delta subunit Source Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) (Q5JFM9_PYRKO) Sequence A:  VVKEVLEIAEKIKNMEIRGAGKIARSAAYALQLQAEKSKA TNVDEFWKEMKQAAKILFETRPTAVSLPNALRYVMHRGKI AYSSGADLEQLRFVIINAAKEFIHNSEKALERIGEFGAKR IEDGDVIMTHXHSKAAISVMKTAWEQGKDIKVIVTETRPK WQGKITAKELASYGIPVIYVVDSAARHYMKMTDKVVMGAD SITVNGAVINKIGTALIALTAKEHRVWTMIAAETYKFHPE TMLGQLVEIEMRDPTEVIPEDELKTWPKNIEVWNPAFDVT PPEYVDVIITERGIIPPYAAIDILREEFGWALKYTEPWED Description Functional site 1) chain A residue 133 type sequence X description BINDING SITE FOR RESIDUE RUB A 401 source : AC1 2) chain A residue 135 type sequence S description BINDING SITE FOR RESIDUE RUB A 401 source : AC1 3) chain A residue 136 type sequence K description BINDING SITE FOR RESIDUE RUB A 401 source : AC1 4) chain A residue 137 type sequence A description BINDING SITE FOR RESIDUE RUB A 401 source : AC1 5) chain A residue 201 type sequence A description BINDING SITE FOR RESIDUE RUB A 401 source : AC1 6) chain A residue 212 type sequence N description BINDING SITE FOR RESIDUE RUB A 401 source : AC1 7) chain A residue 213 type sequence K description BINDING SITE FOR RESIDUE RUB A 401 source : AC1 8) chain A residue 238 type sequence K description BINDING SITE FOR RESIDUE RUB A 401 source : AC1 9) chain A residue 254 type sequence R description BINDING SITE FOR RESIDUE RUB A 401 source : AC1 10) chain A residue 224 type sequence K description BINDING SITE FOR RESIDUE PEG A 402 source : AC2 11) chain A residue 228 type sequence V description BINDING SITE FOR RESIDUE PEG A 402 source : AC2 12) chain A residue 285 type sequence E description BINDING SITE FOR RESIDUE PEG A 402 source : AC2 13) chain A residue 288 type sequence D description BINDING SITE FOR RESIDUE PEG A 402 source : AC2 14) chain A residue 304 type sequence D description BINDING SITE FOR RESIDUE MG A 411 source : AC3 15) chain A residue 227 type SITE sequence R description Plays a key role in hexamerization source Swiss-Prot : SWS_FT_FI5 16) chain A residue 63 type BINDING sequence R description BINDING => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI4 17) chain A residue 238 type BINDING sequence K description BINDING => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI4 18) chain A residue 133 type ACT_SITE sequence X description Proton acceptor => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI1 19) chain A residue 202 type ACT_SITE sequence D description Proton donor => ECO:0000255|HAMAP-Rule:MF_02230, ECO:0000269|PubMed:22511789 source Swiss-Prot : SWS_FT_FI2 20) chain A residue 20 type BINDING sequence R description BINDING => ECO:0000255|HAMAP-Rule:MF_02230 source Swiss-Prot : SWS_FT_FI3 21) chain A residue 135 type BINDING sequence S description BINDING => ECO:0000255|HAMAP-Rule:MF_02230 source Swiss-Prot : SWS_FT_FI3 22) chain A residue 212 type BINDING sequence N description BINDING => ECO:0000255|HAMAP-Rule:MF_02230 source Swiss-Prot : SWS_FT_FI3

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