eF-site ID 3a6z-AC
PDB Code 3a6z
Chain A, C

click to enlarge
Title Crystal structure of Pseudomonas sp. MIS38 lipase (PML) in the open conformation following dialysis against Ca-free buffer
Classification HYDROLASE
Compound Lipase
Source Pseudomonas sp. MIS38 (Q9RBY1_9PSED)
Sequence A:  GVYDYKNFGTADSKALFSDAMAITLYSYHNLDNGFAAGYQ
HNGFGLGLPATLVTALLGGTDSQGVIPGIPWNPDSEKLAL
DAVKKAGWTPITASQLGYDGKTDARGTFFGEKAGYTTAQV
EILGKYDAQGHLTEIGIAFRGTSGPRENLILDSIGDVIND
LLAAFGPKDYAKNYVGEAFGNLLNDVVAFAKANGLSGKDV
LVSGHSLGGLAVNSMADLSGGKWGGFFADSNYIAYASPTQ
SSTDKVLNVGYENDPVFRALDGSTFTGASVGVHDAPKESA
TDNIVSFNDHYASTAWNLLPFSILNIPTWISHLPTAYGDG
MNRIIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNRN
AETHKGSTFIIGSDSNDLIQGGSGNDYLEGRAGNDTFRDG
GGYNVILGGAGNNTLDLQKSVNTFDFANDGAGNLYVRDAN
GGISITRDIGSIVTKEPGFLWGDDVTHSVTASGLKVGSNV
TQYDASVKGTNGADTLKAHAGGDWLFGLDGNDHLIGGVGN
DVFVGGAGNDLMESGGGADTFLFNGAFGQDRVVGFTSNDK
LVFLGVQGVLPNDDFRAHASMVGQDTVLKFGGDSVTLVGV
ALNSLSADGIVIA
C:  GVYDYKNFGTADSKALFSDAMAITLYSYHNLDNGFAAGYQ
HNGFGLGLPATLVTALLGGTDSQGVIPGIPWNPDSEKLAL
DAVKKAGWTPITASQLGYDGKTDARGTFFGEKAGYTTAQV
EILGKYDAQGHLTEIGIAFRGTSGPRENLILDSIGDVIND
LLAAFGPKDYAKNYVGEAFGNLLNDVVAFAKANGLSGKDV
LVSGHSLGGLAVNSMADLSGGKWGGFFADSNYIAYASPTQ
SSTDKVLNVGYENDPVFRALDGSTFTGASVGVHDAPKESA
TDNIVSFNDHYASTAWNLLPFSILNIPTWISHLPTAYGDG
MNRIIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNRN
AETHKGSTFIIGSDSNDLIQGGSGNDYLEGRAGNDTFRDG
GGYNVILGGAGNNTLDLQKSVNTFDFANDGAGNLYVRDAN
GGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTASGLKVG
SNVTQYDASVKGTNGADTLKAHAGGDWLFGLDGNDHLIGG
VGNDVFVGGAGNDLMESGGGADTFLFNGAFGQDRVVGFTS
NDKLVFLGVQGVLPNDDFRAHASMVGQDTVLKFGGDSVTL
VGVALNSLSADGIVIA
Description


Functional site

1) chain A
residue 253
type
sequence E
description BINDING SITE FOR RESIDUE CA A 618
source : AC1

2) chain A
residue 275
type
sequence D
description BINDING SITE FOR RESIDUE CA A 618
source : AC1

3) chain A
residue 283
type
sequence D
description BINDING SITE FOR RESIDUE CA A 618
source : AC1

4) chain A
residue 284
type
sequence N
description BINDING SITE FOR RESIDUE CA A 618
source : AC1

5) chain A
residue 374
type
sequence S
description BINDING SITE FOR RESIDUE CA A 620
source : AC2

6) chain A
residue 376
type
sequence S
description BINDING SITE FOR RESIDUE CA A 620
source : AC2

7) chain A
residue 378
type
sequence D
description BINDING SITE FOR RESIDUE CA A 620
source : AC2

8) chain A
residue 391
type
sequence G
description BINDING SITE FOR RESIDUE CA A 620
source : AC2

9) chain A
residue 393
type
sequence A
description BINDING SITE FOR RESIDUE CA A 620
source : AC2

10) chain A
residue 396
type
sequence D
description BINDING SITE FOR RESIDUE CA A 620
source : AC2

11) chain A
residue 383
type
sequence G
description BINDING SITE FOR RESIDUE CA A 621
source : AC3

12) chain A
residue 385
type
sequence G
description BINDING SITE FOR RESIDUE CA A 621
source : AC3

13) chain A
residue 387
type
sequence D
description BINDING SITE FOR RESIDUE CA A 621
source : AC3

14) chain A
residue 400
type
sequence D
description BINDING SITE FOR RESIDUE CA A 621
source : AC3

15) chain A
residue 402
type
sequence G
description BINDING SITE FOR RESIDUE CA A 621
source : AC3

16) chain A
residue 405
type
sequence N
description BINDING SITE FOR RESIDUE CA A 621
source : AC3

17) chain A
residue 392
type
sequence R
description BINDING SITE FOR RESIDUE CA A 622
source : AC4

18) chain A
residue 394
type
sequence G
description BINDING SITE FOR RESIDUE CA A 622
source : AC4

19) chain A
residue 396
type
sequence D
description BINDING SITE FOR RESIDUE CA A 622
source : AC4

20) chain A
residue 409
type
sequence G
description BINDING SITE FOR RESIDUE CA A 622
source : AC4

21) chain A
residue 411
type
sequence A
description BINDING SITE FOR RESIDUE CA A 622
source : AC4

22) chain A
residue 414
type
sequence N
description BINDING SITE FOR RESIDUE CA A 622
source : AC4

23) chain A
residue 494
type
sequence T
description BINDING SITE FOR RESIDUE CA A 623
source : AC5

24) chain A
residue 496
type
sequence G
description BINDING SITE FOR RESIDUE CA A 623
source : AC5

25) chain A
residue 498
type
sequence D
description BINDING SITE FOR RESIDUE CA A 623
source : AC5

26) chain A
residue 511
type
sequence G
description BINDING SITE FOR RESIDUE CA A 623
source : AC5

27) chain A
residue 513
type
sequence D
description BINDING SITE FOR RESIDUE CA A 623
source : AC5

28) chain A
residue 516
type
sequence D
description BINDING SITE FOR RESIDUE CA A 623
source : AC5

29) chain A
residue 512
type
sequence L
description BINDING SITE FOR RESIDUE CA A 624
source : AC6

30) chain A
residue 514
type
sequence G
description BINDING SITE FOR RESIDUE CA A 624
source : AC6

31) chain A
residue 516
type
sequence D
description BINDING SITE FOR RESIDUE CA A 624
source : AC6

32) chain A
residue 529
type
sequence G
description BINDING SITE FOR RESIDUE CA A 624
source : AC6

33) chain A
residue 531
type
sequence A
description BINDING SITE FOR RESIDUE CA A 624
source : AC6

34) chain A
residue 534
type
sequence D
description BINDING SITE FOR RESIDUE CA A 624
source : AC6

35) chain A
residue 521
type
sequence G
description BINDING SITE FOR RESIDUE CA A 625
source : AC7

36) chain A
residue 523
type
sequence G
description BINDING SITE FOR RESIDUE CA A 625
source : AC7

37) chain A
residue 525
type
sequence D
description BINDING SITE FOR RESIDUE CA A 625
source : AC7

38) chain A
residue 538
type
sequence S
description BINDING SITE FOR RESIDUE CA A 625
source : AC7

39) chain A
residue 540
type
sequence G
description BINDING SITE FOR RESIDUE CA A 625
source : AC7

40) chain A
residue 543
type
sequence D
description BINDING SITE FOR RESIDUE CA A 625
source : AC7

41) chain A
residue 530
type
sequence G
description BINDING SITE FOR RESIDUE CA A 626
source : AC8

42) chain A
residue 532
type
sequence G
description BINDING SITE FOR RESIDUE CA A 626
source : AC8

43) chain A
residue 534
type
sequence D
description BINDING SITE FOR RESIDUE CA A 626
source : AC8

44) chain A
residue 551
type
sequence F
description BINDING SITE FOR RESIDUE CA A 626
source : AC8

45) chain A
residue 554
type
sequence D
description BINDING SITE FOR RESIDUE CA A 626
source : AC8

46) chain A
residue 118
type
sequence T
description BINDING SITE FOR RESIDUE CA A 628
source : AC9

47) chain A
residue 120
type
sequence Q
description BINDING SITE FOR RESIDUE CA A 628
source : AC9

48) chain A
residue 144
type
sequence S
description BINDING SITE FOR RESIDUE CA A 628
source : AC9

49) chain A
residue 153
type
sequence D
description BINDING SITE FOR RESIDUE CA A 628
source : AC9

50) chain A
residue 157
type
sequence D
description BINDING SITE FOR RESIDUE CA A 628
source : AC9

51) chain C
residue 253
type
sequence E
description BINDING SITE FOR RESIDUE CA C 618
source : BC1

52) chain C
residue 275
type
sequence D
description BINDING SITE FOR RESIDUE CA C 618
source : BC1

53) chain C
residue 283
type
sequence D
description BINDING SITE FOR RESIDUE CA C 618
source : BC1

54) chain C
residue 284
type
sequence N
description BINDING SITE FOR RESIDUE CA C 618
source : BC1

55) chain C
residue 374
type
sequence S
description BINDING SITE FOR RESIDUE CA C 620
source : BC2

56) chain C
residue 376
type
sequence S
description BINDING SITE FOR RESIDUE CA C 620
source : BC2

57) chain C
residue 378
type
sequence D
description BINDING SITE FOR RESIDUE CA C 620
source : BC2

58) chain C
residue 391
type
sequence G
description BINDING SITE FOR RESIDUE CA C 620
source : BC2

59) chain C
residue 393
type
sequence A
description BINDING SITE FOR RESIDUE CA C 620
source : BC2

60) chain C
residue 396
type
sequence D
description BINDING SITE FOR RESIDUE CA C 620
source : BC2

61) chain C
residue 383
type
sequence G
description BINDING SITE FOR RESIDUE CA C 621
source : BC3

62) chain C
residue 385
type
sequence G
description BINDING SITE FOR RESIDUE CA C 621
source : BC3

63) chain C
residue 387
type
sequence D
description BINDING SITE FOR RESIDUE CA C 621
source : BC3

64) chain C
residue 400
type
sequence D
description BINDING SITE FOR RESIDUE CA C 621
source : BC3

65) chain C
residue 402
type
sequence G
description BINDING SITE FOR RESIDUE CA C 621
source : BC3

66) chain C
residue 405
type
sequence N
description BINDING SITE FOR RESIDUE CA C 621
source : BC3

67) chain C
residue 494
type
sequence T
description BINDING SITE FOR RESIDUE CA C 623
source : BC4

68) chain C
residue 496
type
sequence G
description BINDING SITE FOR RESIDUE CA C 623
source : BC4

69) chain C
residue 498
type
sequence D
description BINDING SITE FOR RESIDUE CA C 623
source : BC4

70) chain C
residue 511
type
sequence G
description BINDING SITE FOR RESIDUE CA C 623
source : BC4

71) chain C
residue 513
type
sequence D
description BINDING SITE FOR RESIDUE CA C 623
source : BC4

72) chain C
residue 516
type
sequence D
description BINDING SITE FOR RESIDUE CA C 623
source : BC4

73) chain C
residue 512
type
sequence L
description BINDING SITE FOR RESIDUE CA C 624
source : BC5

74) chain C
residue 514
type
sequence G
description BINDING SITE FOR RESIDUE CA C 624
source : BC5

75) chain C
residue 516
type
sequence D
description BINDING SITE FOR RESIDUE CA C 624
source : BC5

76) chain C
residue 529
type
sequence G
description BINDING SITE FOR RESIDUE CA C 624
source : BC5

77) chain C
residue 531
type
sequence A
description BINDING SITE FOR RESIDUE CA C 624
source : BC5

78) chain C
residue 534
type
sequence D
description BINDING SITE FOR RESIDUE CA C 624
source : BC5

79) chain C
residue 521
type
sequence G
description BINDING SITE FOR RESIDUE CA C 625
source : BC6

80) chain C
residue 523
type
sequence G
description BINDING SITE FOR RESIDUE CA C 625
source : BC6

81) chain C
residue 525
type
sequence D
description BINDING SITE FOR RESIDUE CA C 625
source : BC6

82) chain C
residue 538
type
sequence S
description BINDING SITE FOR RESIDUE CA C 625
source : BC6

83) chain C
residue 540
type
sequence G
description BINDING SITE FOR RESIDUE CA C 625
source : BC6

84) chain C
residue 543
type
sequence D
description BINDING SITE FOR RESIDUE CA C 625
source : BC6

85) chain C
residue 530
type
sequence G
description BINDING SITE FOR RESIDUE CA C 626
source : BC7

86) chain C
residue 532
type
sequence G
description BINDING SITE FOR RESIDUE CA C 626
source : BC7

87) chain C
residue 534
type
sequence D
description BINDING SITE FOR RESIDUE CA C 626
source : BC7

88) chain C
residue 551
type
sequence F
description BINDING SITE FOR RESIDUE CA C 626
source : BC7

89) chain C
residue 554
type
sequence D
description BINDING SITE FOR RESIDUE CA C 626
source : BC7

90) chain C
residue 118
type
sequence T
description BINDING SITE FOR RESIDUE CA C 628
source : BC8

91) chain C
residue 120
type
sequence Q
description BINDING SITE FOR RESIDUE CA C 628
source : BC8

92) chain C
residue 144
type
sequence S
description BINDING SITE FOR RESIDUE CA C 628
source : BC8

93) chain C
residue 153
type
sequence D
description BINDING SITE FOR RESIDUE CA C 628
source : BC8

94) chain C
residue 157
type
sequence D
description BINDING SITE FOR RESIDUE CA C 628
source : BC8

95) chain A
residue 201-210
type prosite
sequence VLVSGHSLGG
description LIPASE_SER Lipases, serine active site. VLVSGHSLGG
source prosite : PS00120

96) chain A
residue 507-525
type prosite
sequence DWLFGLDGNDHLIGGVGND
description HEMOLYSIN_CALCIUM Hemolysin-type calcium-binding region signature. DwLfgldGnDhLiGGvgnD
source prosite : PS00330


Display surface

Download
Links