eF-site ID 2zvo-ABDG PDB Code 2zvo Chain A, B, D, G click to enlarge Title NEMO CoZi domain in complex with diubiquitin in C2 space group Classification Transcription/SIGNALING PROTEIN Compound UBC protein Source null (NEMO_MOUSE) Sequence A:  SMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL IFAGKQLEDGRTLSDYNIQKESTLHLVLR B:  GMQLEDLRQQLQQAEEALVAKQELIDKLKEEAAQHAIVME TVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQL QREFNKLK D:  GMQLEDLRQQLQQAEEALVAKQELIDKLKEEAAQHAIVME TVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQL QREFNKLK G:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI FAGKQLEDGRTLSDYNIQKESTLHLV Description Functional site 1) chain B residue 276 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI3 2) chain B residue 285 type CROSSLNK sequence A description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI3 3) chain B residue 295 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI3 4) chain D residue 276 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI3 5) chain D residue 285 type CROSSLNK sequence A description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI3 6) chain D residue 295 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI3 7) chain B residue 270 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI1 8) chain B residue 302 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI1 9) chain D residue 270 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI1 10) chain D residue 302 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:Q9Y6K9 source Swiss-Prot : SWS_FT_FI1 11) chain B residue 278 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:17728323 source Swiss-Prot : SWS_FT_FI2 12) chain B residue 314 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:17728323 source Swiss-Prot : SWS_FT_FI2 13) chain B residue 318 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:17728323 source Swiss-Prot : SWS_FT_FI2 14) chain B residue 319 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:17728323 source Swiss-Prot : SWS_FT_FI2 15) chain D residue 278 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:17728323 source Swiss-Prot : SWS_FT_FI2 16) chain D residue 314 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:17728323 source Swiss-Prot : SWS_FT_FI2 17) chain D residue 318 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:17728323 source Swiss-Prot : SWS_FT_FI2 18) chain D residue 319 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:17728323 source Swiss-Prot : SWS_FT_FI2 19) chain A residue 27-52 type prosite sequence KAKIQDKEGIPPDQQRLIFAGKQLED description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD source prosite : PS00299 20) chain A residue 103-128 type prosite sequence KAKIQDKEGIPPDQQRLIFAGKQLED description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD source prosite : PS00299

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