eF-site ID 2znv-C
PDB Code 2znv
Chain C

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Title Crystal structure of human AMSH-LP DUB domain in complex with Lys63-linked ubiquitin dimer
Classification HYDROLASE/Signaling Protein
Compound AMSH-like protease
Source Homo sapiens (Human) (UBIQ_MOUSE)
Sequence C:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGD
Description


Functional site

1) chain C
residue 32
type
sequence D
description BINDING SITE FOR RESIDUE EDO D 3
source : AC5

2) chain C
residue 27-52
type prosite
sequence KAKIQDKEGIPPDQQRLIFAGKQLED
description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
source prosite : PS00299

3) chain C
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

4) chain C
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

5) chain C
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

6) chain C
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

7) chain C
residue 76
type MOD_RES
sequence G
description ADP-ribosylglycine => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI4

8) chain C
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

9) chain C
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

10) chain C
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

11) chain C
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

12) chain C
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

13) chain C
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

14) chain C
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

15) chain C
residue 76
type CROSSLNK
sequence G
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214
source Swiss-Prot : SWS_FT_FI6


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