eF-site ID 2yyu-AB
PDB Code 2yyu
Chain A, B

click to enlarge
Title Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
Classification LYASE
Compound Orotidine 5'-phosphate decarboxylase
Source Geobacillus kaustophilus (PYRF_GEOKA)
Sequence A:  TPFIVALDFPSKQEVERFLRPFAGTPLFVKVGMELYYQEG
PAIVAFLKEQGHAVFLDLKLHDIPNTVKQAMKGLARVGAD
LVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLT
STDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSA
NEAAFIKERCGASFLAVTPGIRFADRVVTPRKARALGSDY
IVIGRSLTRAADPLRTYARLQHEWN
B:  HTPFIVALDFPSKQEVERFLRPFAGTPLFVKVGMELYYQE
GPAIVAFLKEQGHAVFLDLKLHDIPNTVKQAMKGLARVGA
DLVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQL
TSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCS
ANEAAFIKERCGASFLAVTPGIRFADDAARVVTPRKARAL
GSDYIVIGRSLTRAADPLRTYARLQHEWN
Description


Functional site

1) chain A
residue 12
type
sequence D
description BINDING SITE FOR RESIDUE C5P A 1301
source : AC1

2) chain A
residue 34
type
sequence K
description BINDING SITE FOR RESIDUE C5P A 1301
source : AC1

3) chain A
residue 124
type
sequence T
description BINDING SITE FOR RESIDUE C5P A 1301
source : AC1

4) chain A
residue 186
type
sequence R
description BINDING SITE FOR RESIDUE C5P A 1301
source : AC1

5) chain A
residue 215
type
sequence G
description BINDING SITE FOR RESIDUE C5P A 1301
source : AC1

6) chain A
residue 216
type
sequence R
description BINDING SITE FOR RESIDUE C5P A 1301
source : AC1

7) chain B
residue 10
type
sequence A
description BINDING SITE FOR RESIDUE C5P B 2301
source : AC2

8) chain B
residue 12
type
sequence D
description BINDING SITE FOR RESIDUE C5P B 2301
source : AC2

9) chain B
residue 34
type
sequence K
description BINDING SITE FOR RESIDUE C5P B 2301
source : AC2

10) chain B
residue 124
type
sequence T
description BINDING SITE FOR RESIDUE C5P B 2301
source : AC2

11) chain B
residue 183
type
sequence P
description BINDING SITE FOR RESIDUE C5P B 2301
source : AC2

12) chain B
residue 186
type
sequence R
description BINDING SITE FOR RESIDUE C5P B 2301
source : AC2

13) chain B
residue 215
type
sequence G
description BINDING SITE FOR RESIDUE C5P B 2301
source : AC2

14) chain B
residue 216
type
sequence R
description BINDING SITE FOR RESIDUE C5P B 2301
source : AC2

15) chain A
residue 12
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

16) chain B
residue 34
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

17) chain B
residue 61
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

18) chain B
residue 124
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

19) chain B
residue 186
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

20) chain B
residue 215
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

21) chain B
residue 216
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

22) chain A
residue 34
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

23) chain A
residue 61
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

24) chain A
residue 124
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

25) chain A
residue 186
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

26) chain A
residue 215
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

27) chain A
residue 216
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

28) chain B
residue 12
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI2

29) chain A
residue 63
type ACT_SITE
sequence K
description Proton donor => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI1

30) chain B
residue 63
type ACT_SITE
sequence K
description Proton donor => ECO:0000255|HAMAP-Rule:MF_01200
source Swiss-Prot : SWS_FT_FI1

31) chain A
residue 58-71
type prosite
sequence VFLDLKLHDIPNTV
description OMPDECASE Orotidine 5'-phosphate decarboxylase active site. VFlDlKlhDIPnTV
source prosite : PS00156


Display surface

Download
Links