eF-site ID 2yye-A
PDB Code 2yye
Chain A

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Title Crystal structure of selenophosphate synthetase from Aquifex aeolicus complexed with AMPCPP
Classification TRANSFERASE
Compound Selenide, water dikinase
Source Aquifex aeolicus (strain VF5) (SELD_AQUAE)
Sequence A:  GGIMVELLKLVRSSGCAAKVGPGDLQEILKGFNIYTDEST
LVSIGDDAGVYEHNGIIWVYTVDIITPVVNDPYLWGAIST
ANALSDVYAMGGIPVNALAISCFNNCELDIEIFREVIRGA
LDKLREAKTVLLGGHTIDDKEPKFGLSVAGICPEGKYITQ
SGAQVGQLLILTKPIGTGILIKGLKEGILKEEDINEAIEN
MLALNDKARNLMLSLDATACTDVTGFGLLGHAWNICKNSN
IGARIFFEKVPYYQLSENLVKKKIYPKGAIENLNFVKNYL
KSNLDNWKLILLSDPVTSGGLLFTINKEKLEKIDETAKEL
EVNYWIIGETIAENVLEVL
Description


Functional site

1) chain A
residue 60
type
sequence D
description BINDING SITE FOR RESIDUE CO B 701
source : AC1

2) chain A
residue 44
type
sequence D
description BINDING SITE FOR RESIDUE CO A 702
source : AC2

3) chain A
residue 83
type
sequence D
description BINDING SITE FOR RESIDUE CO A 702
source : AC2

4) chain A
residue 219
type
sequence D
description BINDING SITE FOR RESIDUE CO A 702
source : AC2

5) chain A
residue 60
type
sequence D
description BINDING SITE FOR RESIDUE CO A 703
source : AC3

6) chain A
residue 83
type
sequence D
description BINDING SITE FOR RESIDUE CO A 703
source : AC3

7) chain A
residue 44
type
sequence D
description BINDING SITE FOR RESIDUE CO A 704
source : AC4

8) chain A
residue 58
type
sequence T
description BINDING SITE FOR RESIDUE CO A 704
source : AC4

9) chain A
residue 60
type
sequence D
description BINDING SITE FOR RESIDUE CO A 704
source : AC4

10) chain A
residue 83
type
sequence D
description BINDING SITE FOR RESIDUE CO A 704
source : AC4

11) chain A
residue 43
type
sequence D
description BINDING SITE FOR RESIDUE CO A 705
source : AC5

12) chain A
residue 44
type
sequence D
description BINDING SITE FOR RESIDUE CO A 705
source : AC5

13) chain A
residue 86
type
sequence A
description BINDING SITE FOR RESIDUE CO A 705
source : AC5

14) chain A
residue 87
type
sequence M
description BINDING SITE FOR RESIDUE CO A 705
source : AC5

15) chain A
residue 155
type
sequence I
description BINDING SITE FOR RESIDUE CO A 705
source : AC5

16) chain A
residue 217
type
sequence C
description BINDING SITE FOR RESIDUE CO A 705
source : AC5

17) chain A
residue 132
type
sequence H
description BINDING SITE FOR RESIDUE CO A 801
source : AC6

18) chain A
residue 259
type
sequence K
description BINDING SITE FOR RESIDUE PO4 B 901
source : BC2

19) chain A
residue 16
type
sequence K
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

20) chain A
residue 22
type
sequence L
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

21) chain A
residue 26
type
sequence L
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

22) chain A
residue 42
type
sequence G
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

23) chain A
residue 43
type
sequence D
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

24) chain A
residue 44
type
sequence D
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

25) chain A
residue 60
type
sequence D
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

26) chain A
residue 83
type
sequence D
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

27) chain A
residue 221
type
sequence T
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

28) chain A
residue 222
type
sequence G
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

29) chain A
residue 223
type
sequence F
description BINDING SITE FOR RESIDUE APC A 501
source : BC3

30) chain A
residue 96
type
sequence A
description BINDING SITE FOR RESIDUE APC B 601
source : BC4

31) chain A
residue 98
type
sequence S
description BINDING SITE FOR RESIDUE APC B 601
source : BC4

32) chain A
residue 130
type
sequence G
description BINDING SITE FOR RESIDUE APC B 601
source : BC4

33) chain A
residue 131
type
sequence G
description BINDING SITE FOR RESIDUE APC B 601
source : BC4

34) chain A
residue 132
type
sequence H
description BINDING SITE FOR RESIDUE APC B 601
source : BC4

35) chain A
residue 133
type
sequence T
description BINDING SITE FOR RESIDUE APC B 601
source : BC4

36) chain A
residue 13
type ACT_SITE
sequence C
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00625
source Swiss-Prot : SWS_FT_FI1

37) chain A
residue 16
type BINDING
sequence K
description in other chain => ECO:0000255|HAMAP-Rule:MF_00625
source Swiss-Prot : SWS_FT_FI2

38) chain A
residue 41
type BINDING
sequence I
description in other chain => ECO:0000255|HAMAP-Rule:MF_00625
source Swiss-Prot : SWS_FT_FI2

39) chain A
residue 60
type BINDING
sequence D
description in other chain => ECO:0000255|HAMAP-Rule:MF_00625
source Swiss-Prot : SWS_FT_FI2

40) chain A
residue 44
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00625
source Swiss-Prot : SWS_FT_FI3

41) chain A
residue 83
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00625
source Swiss-Prot : SWS_FT_FI3

42) chain A
residue 131
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_00625
source Swiss-Prot : SWS_FT_FI3

43) chain A
residue 219
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00625
source Swiss-Prot : SWS_FT_FI3

44) chain A
residue 16
type SITE
sequence K
description Important for catalytic activity => ECO:0000255|HAMAP-Rule:MF_00625
source Swiss-Prot : SWS_FT_FI4


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