eF-site ID 2yvp-A
PDB Code 2yvp
Chain A

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Title Crystal structure of NDX2 in complex with MG2+ and ampcpr from thermus thermophilus HB8
Classification HYDROLASE
Compound MutT/nudix family protein
Source Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (Q5SJY9_THET8)
Sequence A:  MSPWERILLEEILSEPVRLVKERVRTHTGRELTYVYRPGP
VAASFVLPVTERGTALLVRQYRHPTGKFLLEVPAGKVDEG
ETPEAAARRELREEVGAEAETLIPLPSFHPQPSFTAVVFH
PFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKGEI
QDASTALTLFYAEPHLKRLGLL
Description


Functional site

1) chain A
residue 90
type
sequence E
description BINDING SITE FOR RESIDUE MG A 183
source : AC1

2) chain A
residue 94
type
sequence E
description BINDING SITE FOR RESIDUE MG A 183
source : AC1

3) chain A
residue 139
type
sequence E
description BINDING SITE FOR RESIDUE MG A 183
source : AC1

4) chain A
residue 74
type
sequence A
description BINDING SITE FOR RESIDUE MG A 184
source : AC2

5) chain A
residue 94
type
sequence E
description BINDING SITE FOR RESIDUE MG A 184
source : AC2

6) chain A
residue 139
type
sequence E
description BINDING SITE FOR RESIDUE MG A 184
source : AC2

7) chain A
residue 90
type
sequence E
description BINDING SITE FOR RESIDUE MG A 185
source : AC3

8) chain A
residue 136
type
sequence E
description BINDING SITE FOR RESIDUE MG A 185
source : AC3

9) chain A
residue 16
type
sequence P
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

10) chain A
residue 33
type
sequence T
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

11) chain A
residue 34
type
sequence Y
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

12) chain A
residue 43
type
sequence A
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

13) chain A
residue 62
type
sequence R
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

14) chain A
residue 74
type
sequence A
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

15) chain A
residue 75
type
sequence G
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

16) chain A
residue 76
type
sequence K
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

17) chain A
residue 90
type
sequence E
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

18) chain A
residue 94
type
sequence E
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

19) chain A
residue 111
type
sequence Q
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

20) chain A
residue 113
type
sequence S
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

21) chain A
residue 114
type
sequence F
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

22) chain A
residue 119
type
sequence F
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

23) chain A
residue 136
type
sequence E
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

24) chain A
residue 137
type
sequence E
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

25) chain A
residue 138
type
sequence G
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

26) chain A
residue 139
type
sequence E
description BINDING SITE FOR RESIDUE RBY A 186
source : AC4

27) chain A
residue 75-96
type prosite
sequence GKVDEGETPEAAARRELREEVG
description NUDIX_BOX Nudix box signature. GkvdegEtpeaAArRELrEEvG
source prosite : PS00893


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