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eF-site ID
|
2yq2-B |
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PDB Code
|
2yq2 |
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Chain
|
B |
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click to enlarge
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Title
|
Structure of BVDV1 envelope glycoprotein E2, pH8 |
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Classification
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VIRAL PROTEIN |
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Compound
|
BVDV1 E2 |
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Source
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(2YQ2) |
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Sequence
|
B: |
TGCKPEYYYAIAKNDRIGPLGAEGLTTVWKDYSPEMTLED
TMVIASCRDGKFMYLSRCTRETRYLAILHSRALPTSVVFK
KLFEGQKQGDTVEMDDDFEFGLCPCDAKPIVRGKYNTTLL
NGPAFQMVCPIGWTGTVSCMLANRDTLDTAVVRTYRRSRP
FPYRQGCITQKVLGEDLYDCILGGNWTCVTGDQLQYSGGS
IESCKWCGFKFQRSEGLPHYPIGKCRLKNETGYRLVDNTS
CNREGVAIVPQGTVKCKIGDTTVQVIALDTKLGPMPCKPY
EIISSEGPVEKTACTFNYTKTLKNKYFEPRDSYFQQYMLK
GEYQYWFDLE
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Description
|
(1) |
BVDV1 E2
|
|
Functional site
|
|
|
1)
|
chain |
B |
| residue |
70 |
| type |
SITE |
| sequence |
H
|
| description |
Serves as pH sensor to control fusion => ECO:0000250|UniProtKB:P19711
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
2)
|
chain |
B |
| residue |
117 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23273918
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
3)
|
chain |
B |
| residue |
186 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23273918
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
4)
|
chain |
B |
| residue |
230 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23273918
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
5)
|
chain |
B |
| residue |
298 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23273918
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|