eF-site ID 2ypd-AB
PDB Code 2ypd
Chain A, B

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Title Crystal structure of the Jumonji domain of human Jumonji domain containing 1C protein
Classification OXIDOREDUCTASE
Compound PROBABLE JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROT EIN 2C
Source Homo sapiens (Human) (JHD2C_HUMAN)
Sequence A:  MIPHSWICEKHILWLKDYKNSSNWKLFKECWKQGQPAVVS
GVHKKMNISLWKAESISLDFGDHQADLLNCKDSIISNANV
KEFWDGFEEVSKRETVVLKLKDWPSGEDFKTMMPARYEDL
LKSLPLPEYCNPEGKFNLASHLPGFFVRGPRLCSAYGVVA
AKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAGIL
KKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIRE
FLQKISKEQGHDPIRDQSWYVNKKLRQRLLEEYGVRTCTL
IQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVES
FHLTQEL
B:  MIPHSWICEKHILWLKDYKNSSNWKLFKECWKQGQPAVVS
GVHKKMNISLWKAESISLDFGDHQADLLNCKDSIISNANV
KEFWDGFEEVSKRETVVLKLKDWPSGEDFKTMMPARYEDL
LKSLPLPEYCNPEGKFNLASHLPGFFVGPRLCSAYGVVAA
KDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAGILK
KFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREF
LQKISKEQGHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLI
QFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESF
HLTQEL
Description (1)  PROBABLE JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROT EIN 2C (E.C.1.14.11.-)


Functional site

1) chain A
residue 2163
type
sequence C
description BINDING SITE FOR RESIDUE EMT A 3498
source : AC1

2) chain A
residue 2166
type
sequence H
description BINDING SITE FOR RESIDUE EMT A 3498
source : AC1

3) chain A
residue 2446
type
sequence R
description BINDING SITE FOR RESIDUE EMT A 3498
source : AC1

4) chain A
residue 2447
type
sequence T
description BINDING SITE FOR RESIDUE EMT A 3498
source : AC1

5) chain A
residue 2448
type
sequence C
description BINDING SITE FOR RESIDUE EMT A 3498
source : AC1

6) chain A
residue 2166
type
sequence H
description BINDING SITE FOR RESIDUE EMT A 3499
source : AC2

7) chain A
residue 2393
type
sequence I
description BINDING SITE FOR RESIDUE EMT A 3499
source : AC2

8) chain A
residue 2446
type
sequence R
description BINDING SITE FOR RESIDUE EMT A 3499
source : AC2

9) chain A
residue 2448
type
sequence C
description BINDING SITE FOR RESIDUE EMT A 3499
source : AC2

10) chain A
residue 2184
type
sequence E
description BINDING SITE FOR RESIDUE EMT A 3500
source : AC3

11) chain A
residue 2185
type
sequence C
description BINDING SITE FOR RESIDUE EMT A 3500
source : AC3

12) chain A
residue 2188
type
sequence Q
description BINDING SITE FOR RESIDUE EMT A 3500
source : AC3

13) chain B
residue 2166
type
sequence H
description BINDING SITE FOR RESIDUE EMT B 3498
source : AC4

14) chain B
residue 2393
type
sequence I
description BINDING SITE FOR RESIDUE EMT B 3498
source : AC4

15) chain B
residue 2446
type
sequence R
description BINDING SITE FOR RESIDUE EMT B 3498
source : AC4

16) chain B
residue 2448
type
sequence C
description BINDING SITE FOR RESIDUE EMT B 3498
source : AC4

17) chain B
residue 2163
type
sequence C
description BINDING SITE FOR RESIDUE EMT B 3499
source : AC5

18) chain B
residue 2166
type
sequence H
description BINDING SITE FOR RESIDUE EMT B 3499
source : AC5

19) chain B
residue 2446
type
sequence R
description BINDING SITE FOR RESIDUE EMT B 3499
source : AC5

20) chain B
residue 2447
type
sequence T
description BINDING SITE FOR RESIDUE EMT B 3499
source : AC5

21) chain B
residue 2448
type
sequence C
description BINDING SITE FOR RESIDUE EMT B 3499
source : AC5

22) chain B
residue 2184
type
sequence E
description BINDING SITE FOR RESIDUE EMT B 3500
source : AC6

23) chain B
residue 2185
type
sequence C
description BINDING SITE FOR RESIDUE EMT B 3500
source : AC6

24) chain B
residue 2188
type
sequence Q
description BINDING SITE FOR RESIDUE EMT B 3500
source : AC6

25) chain B
residue 2190
type
sequence Q
description BINDING SITE FOR RESIDUE EMT B 3500
source : AC6

26) chain A
residue 2225
type
sequence C
description BINDING SITE FOR RESIDUE EMT A 3501
source : AC7

27) chain A
residue 2260
type
sequence K
description BINDING SITE FOR RESIDUE EMT A 3501
source : AC7

28) chain A
residue 2331
type
sequence G
description BINDING SITE FOR RESIDUE EMT A 3501
source : AC7

29) chain A
residue 2332
type
sequence T
description BINDING SITE FOR RESIDUE EMT A 3501
source : AC7

30) chain A
residue 2334
type
sequence N
description BINDING SITE FOR RESIDUE EMT A 3501
source : AC7

31) chain A
residue 2260
type
sequence K
description BINDING SITE FOR RESIDUE EMT A 3502
source : AC8

32) chain A
residue 2263
type
sequence D
description BINDING SITE FOR RESIDUE EMT A 3502
source : AC8

33) chain A
residue 2317
type
sequence C
description BINDING SITE FOR RESIDUE EMT A 3502
source : AC8

34) chain B
residue 2263
type
sequence D
description BINDING SITE FOR RESIDUE EMT B 3501
source : AC9

35) chain B
residue 2315
type
sequence R
description BINDING SITE FOR RESIDUE EMT B 3501
source : AC9

36) chain B
residue 2317
type
sequence C
description BINDING SITE FOR RESIDUE EMT B 3501
source : AC9

37) chain B
residue 2476
type
sequence Q
description BINDING SITE FOR RESIDUE EMT B 3501
source : AC9

38) chain B
residue 2478
type
sequence T
description BINDING SITE FOR RESIDUE EMT B 3501
source : AC9

39) chain B
residue 2317
type
sequence C
description BINDING SITE FOR RESIDUE EMT B 3502
source : BC1

40) chain B
residue 2333
type
sequence T
description BINDING SITE FOR RESIDUE EMT B 3502
source : BC1

41) chain B
residue 2344
type
sequence N
description BINDING SITE FOR RESIDUE EMT B 3502
source : BC1

42) chain B
residue 2476
type
sequence Q
description BINDING SITE FOR RESIDUE EMT B 3502
source : BC1

43) chain A
residue 2317
type
sequence C
description BINDING SITE FOR RESIDUE EMT A 3503
source : BC2

44) chain A
residue 2333
type
sequence T
description BINDING SITE FOR RESIDUE EMT A 3503
source : BC2

45) chain A
residue 2476
type
sequence Q
description BINDING SITE FOR RESIDUE EMT A 3503
source : BC2

46) chain B
residue 2274
type
sequence M
description BINDING SITE FOR RESIDUE NA B 3503
source : BC3

47) chain B
residue 2275
type
sequence P
description BINDING SITE FOR RESIDUE NA B 3503
source : BC3

48) chain B
residue 2276
type
sequence A
description BINDING SITE FOR RESIDUE NA B 3503
source : BC3

49) chain B
residue 2277
type
sequence R
description BINDING SITE FOR RESIDUE NA B 3503
source : BC3

50) chain A
residue 2274
type
sequence M
description BINDING SITE FOR RESIDUE NA A 3504
source : BC4

51) chain A
residue 2276
type
sequence A
description BINDING SITE FOR RESIDUE NA A 3504
source : BC4

52) chain A
residue 2277
type
sequence R
description BINDING SITE FOR RESIDUE NA A 3504
source : BC4

53) chain A
residue 2336
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00538
source Swiss-Prot : SWS_FT_FI1

54) chain A
residue 2338
type BINDING
sequence E
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00538
source Swiss-Prot : SWS_FT_FI1

55) chain A
residue 2466
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00538
source Swiss-Prot : SWS_FT_FI1

56) chain B
residue 2336
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00538
source Swiss-Prot : SWS_FT_FI1

57) chain B
residue 2338
type BINDING
sequence E
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00538
source Swiss-Prot : SWS_FT_FI1

58) chain B
residue 2466
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00538
source Swiss-Prot : SWS_FT_FI1


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