eF-site ID 2ypa-ABCD
PDB Code 2ypa
Chain A, B, C, D

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Title Structure of the SCL:E47:LMO2:LDB1 complex bound to DNA
Classification IMMUNE SYSTEM
Compound T-CELL ACUTE LYMPHOCYTIC LEUKEMIA PROTEIN 1
Source Homo sapiens (Human) (2YPA)
Sequence A:  PHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDK
KLSKNEILRLAMKYINFLAKLLNDQEE
B:  EKDLRDRERRMANNARERVRVRDINEAFRELGRMCQMHLK
SDKAQTKLLILQQAVQVILGLEQQVRERNLNPK
C:  CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGR
RLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRAYEMTMR
VKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIY
EWTKIN
D:  DVMVVGEPTLMGGEFGDEDERLITRLENTQ
Description (1)  T-CELL ACUTE LYMPHOCYTIC LEUKEMIA PROTEIN 1, TRANSCRIPTION FACTOR E2-ALPHA, RHOMBOTIN-2, LIM DOMAIN-BINDING PROTEIN 1


Functional site

1) chain C
residue 122
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1156
source : AC1

2) chain C
residue 125
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1156
source : AC1

3) chain C
residue 144
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1156
source : AC1

4) chain C
residue 147
type
sequence D
description BINDING SITE FOR RESIDUE ZN C 1156
source : AC1

5) chain C
residue 94
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1157
source : AC2

6) chain C
residue 97
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1157
source : AC2

7) chain C
residue 116
type
sequence H
description BINDING SITE FOR RESIDUE ZN C 1157
source : AC2

8) chain C
residue 119
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1157
source : AC2

9) chain C
residue 57
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1158
source : AC3

10) chain C
residue 60
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1158
source : AC3

11) chain C
residue 80
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1158
source : AC3

12) chain C
residue 83
type
sequence D
description BINDING SITE FOR RESIDUE ZN C 1158
source : AC3

13) chain C
residue 30
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1159
source : AC4

14) chain C
residue 33
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1159
source : AC4

15) chain C
residue 51
type
sequence H
description BINDING SITE FOR RESIDUE ZN C 1159
source : AC4

16) chain C
residue 54
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1159
source : AC4

17) chain C
residue 30-64
type prosite
sequence CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRL
description LIM_DOMAIN_1 LIM zinc-binding domain signature. CggCqqnigdryflkaidqy.....WHedClsCdlCgcrL
source prosite : PS00478

18) chain C
residue 94-129
type prosite
sequence CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHF
description LIM_DOMAIN_1 LIM zinc-binding domain signature. CggCqqnigdryflkaidqy.....WHedClsCdlCgcrL
source prosite : PS00478


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