eF-site ID 2yfe-B
PDB Code 2yfe
Chain B

click to enlarge
Title Ligand binding domain of human PPAR gamma in complex with amorfrutin 1
Classification RECEPTOR
Compound PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
Source Homo sapiens (Human) (PPARG_HUMAN)
Sequence B:  PESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKS
PFVIYDMNSLMMGEDKIKFKHITPSKEVAIRIFQGCQFRS
VEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTM
LASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFE
FAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDI
QDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEH
VQLLQVIKKTETDMLHPLLQEIYK
Description


Functional site

1) chain B
residue 226
type
sequence F
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

2) chain B
residue 255
type
sequence L
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

3) chain B
residue 259
type
sequence E
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

4) chain B
residue 264
type
sequence F
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

5) chain B
residue 266
type
sequence H
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

6) chain B
residue 280
type
sequence R
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

7) chain B
residue 281
type
sequence I
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

8) chain B
residue 285
type
sequence C
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

9) chain B
residue 288
type
sequence R
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

10) chain B
residue 289
type
sequence S
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

11) chain B
residue 292
type
sequence A
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

12) chain B
residue 329
type
sequence M
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

13) chain B
residue 330
type
sequence L
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

14) chain B
residue 333
type
sequence L
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

15) chain B
residue 340
type
sequence L
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

16) chain B
residue 341
type
sequence I
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

17) chain B
residue 342
type
sequence S
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

18) chain B
residue 348
type
sequence M
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

19) chain B
residue 363
type
sequence F
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

20) chain B
residue 364
type
sequence M
description BINDING SITE FOR RESIDUE YFE B 999
source : AC2

21) chain B
residue 314
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

22) chain B
residue 351
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

23) chain B
residue 252
type CROSSLNK
sequence M
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links