eF-site ID 2yfe-A
PDB Code 2yfe
Chain A

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Title Ligand binding domain of human PPAR gamma in complex with amorfrutin 1
Classification RECEPTOR
Compound PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
Source Homo sapiens (Human) (PPARG_HUMAN)
Sequence A:  DQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKT
TDKSPFVIYDMNSLMMGEDKISKEVAIRIFQGCQFRSVEA
VQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAV
KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDN
LLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL
LQVIKKTETDMSLHPLLQEIYKDL
Description


Functional site

1) chain A
residue 280
type
sequence R
description BINDING SITE FOR RESIDUE YFE A 999
source : AC1

2) chain A
residue 281
type
sequence I
description BINDING SITE FOR RESIDUE YFE A 999
source : AC1

3) chain A
residue 285
type
sequence C
description BINDING SITE FOR RESIDUE YFE A 999
source : AC1

4) chain A
residue 288
type
sequence R
description BINDING SITE FOR RESIDUE YFE A 999
source : AC1

5) chain A
residue 330
type
sequence L
description BINDING SITE FOR RESIDUE YFE A 999
source : AC1

6) chain A
residue 341
type
sequence I
description BINDING SITE FOR RESIDUE YFE A 999
source : AC1

7) chain A
residue 342
type
sequence S
description BINDING SITE FOR RESIDUE YFE A 999
source : AC1

8) chain A
residue 348
type
sequence M
description BINDING SITE FOR RESIDUE YFE A 999
source : AC1

9) chain A
residue 314
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

10) chain A
residue 351
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

11) chain A
residue 252
type CROSSLNK
sequence M
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


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