eF-site ID 2ydk-A
PDB Code 2ydk
Chain A

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Title Discovery of Checkpoint Kinase Inhibitor AZD7762 by Structure Based Design and Optimization of Thiophene Carboxamide Ureas
Classification TRANSFERASE
Compound SERINE/THREONINE-PROTEIN KINASE CHK1
Source (CHK1_HUMAN)
Sequence A:  VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM
KRENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC
SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT
HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM
CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP
WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV
ENPSARITIPDIKKDRWYNKPLK
Description


Functional site

1) chain A
residue 129
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1271
source : AC1

2) chain A
residue 153
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 1271
source : AC1

3) chain A
residue 162
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1271
source : AC1

4) chain A
residue 166
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1271
source : AC1

5) chain A
residue 74
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 1272
source : AC2

6) chain A
residue 75
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 1272
source : AC2

7) chain A
residue 232
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 1272
source : AC2

8) chain A
residue 235
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 1272
source : AC2

9) chain A
residue 10
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 1273
source : AC3

10) chain A
residue 12
type
sequence V
description BINDING SITE FOR RESIDUE GOL A 1273
source : AC3

11) chain A
residue 162
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 1273
source : AC3

12) chain A
residue 33
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1274
source : AC4

13) chain A
residue 71
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 1274
source : AC4

14) chain A
residue 225
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 1274
source : AC4

15) chain A
residue 227
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 1274
source : AC4

16) chain A
residue 228
type
sequence L
description BINDING SITE FOR RESIDUE GOL A 1274
source : AC4

17) chain A
residue 156
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 1275
source : AC5

18) chain A
residue 161
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1275
source : AC5

19) chain A
residue 187
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1275
source : AC5

20) chain A
residue 93
type
sequence F
description BINDING SITE FOR RESIDUE GOL A 1276
source : AC6

21) chain A
residue 204
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 1276
source : AC6

22) chain A
residue 205
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1276
source : AC6

23) chain A
residue 23
type
sequence V
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

24) chain A
residue 36
type
sequence A
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

25) chain A
residue 68
type
sequence V
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

26) chain A
residue 85
type
sequence E
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

27) chain A
residue 86
type
sequence Y
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

28) chain A
residue 87
type
sequence C
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

29) chain A
residue 88
type
sequence S
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

30) chain A
residue 90
type
sequence G
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

31) chain A
residue 91
type
sequence E
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

32) chain A
residue 134
type
sequence E
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

33) chain A
residue 135
type
sequence N
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

34) chain A
residue 137
type
sequence L
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

35) chain A
residue 148
type
sequence D
description BINDING SITE FOR RESIDUE YDK A 1277
source : AC7

36) chain A
residue 15-38
type prosite
sequence LGEGAYGEVQLAVNRVTEEAVAVK
description PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGEGAYGEVQlAvnrvteea..........VAVK
source prosite : PS00107

37) chain A
residue 126-138
type prosite
sequence ITHRDIKPENLLL
description PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. ItHrDIKpeNLLL
source prosite : PS00108

38) chain A
residue 130
type ACT_SITE
sequence D
description Proton acceptor
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 15
type BINDING
sequence L
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI2

40) chain A
residue 38
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI2

41) chain A
residue 132
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32357935
source Swiss-Prot : SWS_FT_FI3


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