eF-site ID 2ycb-AB
PDB Code 2ycb
Chain A, B

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Title Structure of the archaeal beta-CASP protein with N-terminal KH domains from Methanothermobacter thermautotrophicus
Classification HYDROLASE
Compound CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR
Source Methanobacterium thermoautotrophicum (strain Delta H) (O27271_METTH)
Sequence A:  SEMLEEIKRTIMQRLPERVQVAKVEFEGPEVVIYTKNPEI
ITENGNLIRDIAKDIRKRIIIRSDRSVLMDPEKAIRKIHE
IVPEEAKITNISFDDVTCEVIIEARKPGLVIGKYGSTSRE
IVKNTGWAPKILRTPPISSEIIERIRRTLRKNSKERKKIL
QQLGNRIHQKPKYDNDWARLTAMGGFREVGRSCLYLQTPN
SRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITH
AHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHID
IAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRL
TLHNAGHILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLLE
AAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIY
STLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVPV
YIDGMIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISDI
FHKVNGMDERREIVEGEPSIILSTSGMLTGGNSLEYFKWL
CEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMR
VYNVRMNIKTIEGFSGHSDRRQLMEYVKRISPKPEKILLC
HGDNYKTLDLASSIYRTYRIETKTPLNLETVRIQ
B:  VSEMLEEIKRTIMQRLPERVQVAKVEFEGPEVVIYTKNPE
IITENGNLIRDIAKDIRKRIIIRSDRSVLMDPEKAIRKIH
EIVPEEAKITNISFDDVTCEVIIEARKPGLVIGKYGSTSR
EIVKNTGWAPKILRTPPISSEIIERIRRTLRKNSKERKKI
LQQLGNRIHQKPKYDNDWARLTAMGGFREVGRSCLYLQTP
NSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIIT
HAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHI
DIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIR
LTLHNAGHILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLL
EAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTI
YSTLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVP
VYIDGMIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISD
IFHKVNGMDERREIVEGEPSIILSTSGMLTGGNSLEYFKW
LCEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKM
RVYNVRMNIKTIEGFSGHSDRRQLMEYVKRISPKPEKILL
CHGDNYKTLDLASSIYRTYRIETKTPLNLETVRIQ
Description


Functional site

1) chain A
residue 246
type
sequence D
description BINDING SITE FOR RESIDUE ZN A 1637
source : AC1

2) chain A
residue 247
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1637
source : AC1

3) chain A
residue 352
type
sequence D
description BINDING SITE FOR RESIDUE ZN A 1637
source : AC1

4) chain A
residue 603
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1637
source : AC1

5) chain A
residue 242
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1638
source : AC2

6) chain A
residue 244
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1638
source : AC2

7) chain A
residue 329
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1638
source : AC2

8) chain A
residue 352
type
sequence D
description BINDING SITE FOR RESIDUE ZN A 1638
source : AC2

9) chain A
residue 242
type
sequence H
description BINDING SITE FOR RESIDUE PO4 A 1639
source : AC3

10) chain A
residue 244
type
sequence H
description BINDING SITE FOR RESIDUE PO4 A 1639
source : AC3

11) chain A
residue 246
type
sequence D
description BINDING SITE FOR RESIDUE PO4 A 1639
source : AC3

12) chain A
residue 247
type
sequence H
description BINDING SITE FOR RESIDUE PO4 A 1639
source : AC3

13) chain A
residue 329
type
sequence H
description BINDING SITE FOR RESIDUE PO4 A 1639
source : AC3

14) chain A
residue 352
type
sequence D
description BINDING SITE FOR RESIDUE PO4 A 1639
source : AC3

15) chain A
residue 579
type
sequence H
description BINDING SITE FOR RESIDUE PO4 A 1639
source : AC3

16) chain A
residue 603
type
sequence H
description BINDING SITE FOR RESIDUE PO4 A 1639
source : AC3

17) chain A
residue 135
type
sequence R
description BINDING SITE FOR RESIDUE PO4 A 1640
source : AC4

18) chain A
residue 467
type
sequence R
description BINDING SITE FOR RESIDUE PO4 A 1640
source : AC4

19) chain A
residue 468
type
sequence D
description BINDING SITE FOR RESIDUE PO4 A 1640
source : AC4

20) chain A
residue 472
type
sequence H
description BINDING SITE FOR RESIDUE PO4 A 1640
source : AC4

21) chain B
residue 472
type
sequence H
description BINDING SITE FOR RESIDUE PO4 A 1640
source : AC4

22) chain A
residue 464
type
sequence K
description BINDING SITE FOR RESIDUE PO4 A 1641
source : AC5

23) chain A
residue 467
type
sequence R
description BINDING SITE FOR RESIDUE PO4 A 1641
source : AC5

24) chain A
residue 468
type
sequence D
description BINDING SITE FOR RESIDUE PO4 A 1641
source : AC5

25) chain B
residue 472
type
sequence H
description BINDING SITE FOR RESIDUE PO4 A 1641
source : AC5

26) chain A
residue 468
type
sequence D
description BINDING SITE FOR RESIDUE ZN A 1642
source : AC6

27) chain A
residue 472
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1642
source : AC6

28) chain B
residue 472
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1642
source : AC6

29) chain A
residue 225
type
sequence L
description BINDING SITE FOR RESIDUE K A 1643
source : AC7

30) chain A
residue 227
type
sequence V
description BINDING SITE FOR RESIDUE K A 1643
source : AC7

31) chain A
residue 230
type
sequence F
description BINDING SITE FOR RESIDUE K A 1643
source : AC7

32) chain B
residue 246
type
sequence D
description BINDING SITE FOR RESIDUE ZN B 1637
source : AC8

33) chain B
residue 247
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1637
source : AC8

34) chain B
residue 352
type
sequence D
description BINDING SITE FOR RESIDUE ZN B 1637
source : AC8

35) chain B
residue 603
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1637
source : AC8

36) chain B
residue 242
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1638
source : AC9

37) chain B
residue 244
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1638
source : AC9

38) chain B
residue 329
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1638
source : AC9

39) chain B
residue 352
type
sequence D
description BINDING SITE FOR RESIDUE ZN B 1638
source : AC9

40) chain B
residue 242
type
sequence H
description BINDING SITE FOR RESIDUE PO4 B 1639
source : BC1

41) chain B
residue 244
type
sequence H
description BINDING SITE FOR RESIDUE PO4 B 1639
source : BC1

42) chain B
residue 246
type
sequence D
description BINDING SITE FOR RESIDUE PO4 B 1639
source : BC1

43) chain B
residue 247
type
sequence H
description BINDING SITE FOR RESIDUE PO4 B 1639
source : BC1

44) chain B
residue 329
type
sequence H
description BINDING SITE FOR RESIDUE PO4 B 1639
source : BC1

45) chain B
residue 352
type
sequence D
description BINDING SITE FOR RESIDUE PO4 B 1639
source : BC1

46) chain B
residue 579
type
sequence H
description BINDING SITE FOR RESIDUE PO4 B 1639
source : BC1

47) chain B
residue 603
type
sequence H
description BINDING SITE FOR RESIDUE PO4 B 1639
source : BC1

48) chain B
residue 225
type
sequence L
description BINDING SITE FOR RESIDUE K B 1640
source : BC2

49) chain B
residue 227
type
sequence V
description BINDING SITE FOR RESIDUE K B 1640
source : BC2

50) chain B
residue 230
type
sequence F
description BINDING SITE FOR RESIDUE K B 1640
source : BC2

51) chain A
residue 242
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

52) chain B
residue 246
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

53) chain B
residue 247
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

54) chain B
residue 329
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

55) chain B
residue 352
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

56) chain B
residue 603
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

57) chain A
residue 244
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

58) chain A
residue 246
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

59) chain A
residue 247
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

60) chain A
residue 329
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

61) chain A
residue 352
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

62) chain A
residue 603
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

63) chain B
residue 242
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1

64) chain B
residue 244
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
source Swiss-Prot : SWS_FT_FI1


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