eF-site ID 2ycb-AB PDB Code 2ycb Chain A, B click to enlarge Title Structure of the archaeal beta-CASP protein with N-terminal KH domains from Methanothermobacter thermautotrophicus Classification HYDROLASE Compound CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR Source Methanobacterium thermoautotrophicum (strain Delta H) (O27271_METTH) Sequence A:  SEMLEEIKRTIMQRLPERVQVAKVEFEGPEVVIYTKNPEI ITENGNLIRDIAKDIRKRIIIRSDRSVLMDPEKAIRKIHE IVPEEAKITNISFDDVTCEVIIEARKPGLVIGKYGSTSRE IVKNTGWAPKILRTPPISSEIIERIRRTLRKNSKERKKIL QQLGNRIHQKPKYDNDWARLTAMGGFREVGRSCLYLQTPN SRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITH AHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHID IAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRL TLHNAGHILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLLE AAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIY STLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVPV YIDGMIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISDI FHKVNGMDERREIVEGEPSIILSTSGMLTGGNSLEYFKWL CEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMR VYNVRMNIKTIEGFSGHSDRRQLMEYVKRISPKPEKILLC HGDNYKTLDLASSIYRTYRIETKTPLNLETVRIQ B:  VSEMLEEIKRTIMQRLPERVQVAKVEFEGPEVVIYTKNPE IITENGNLIRDIAKDIRKRIIIRSDRSVLMDPEKAIRKIH EIVPEEAKITNISFDDVTCEVIIEARKPGLVIGKYGSTSR EIVKNTGWAPKILRTPPISSEIIERIRRTLRKNSKERKKI LQQLGNRIHQKPKYDNDWARLTAMGGFREVGRSCLYLQTP NSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIIT HAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHI DIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIR LTLHNAGHILGSAMAHLHIGDGQHNMVYTGDFKYEQSRLL EAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTI YSTLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVP VYIDGMIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISD IFHKVNGMDERREIVEGEPSIILSTSGMLTGGNSLEYFKW LCEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKM RVYNVRMNIKTIEGFSGHSDRRQLMEYVKRISPKPEKILL CHGDNYKTLDLASSIYRTYRIETKTPLNLETVRIQ Description Functional site 1) chain A residue 246 type sequence D description BINDING SITE FOR RESIDUE ZN A 1637 source : AC1 2) chain A residue 247 type sequence H description BINDING SITE FOR RESIDUE ZN A 1637 source : AC1 3) chain A residue 352 type sequence D description BINDING SITE FOR RESIDUE ZN A 1637 source : AC1 4) chain A residue 603 type sequence H description BINDING SITE FOR RESIDUE ZN A 1637 source : AC1 5) chain A residue 242 type sequence H description BINDING SITE FOR RESIDUE ZN A 1638 source : AC2 6) chain A residue 244 type sequence H description BINDING SITE FOR RESIDUE ZN A 1638 source : AC2 7) chain A residue 329 type sequence H description BINDING SITE FOR RESIDUE ZN A 1638 source : AC2 8) chain A residue 352 type sequence D description BINDING SITE FOR RESIDUE ZN A 1638 source : AC2 9) chain A residue 242 type sequence H description BINDING SITE FOR RESIDUE PO4 A 1639 source : AC3 10) chain A residue 244 type sequence H description BINDING SITE FOR RESIDUE PO4 A 1639 source : AC3 11) chain A residue 246 type sequence D description BINDING SITE FOR RESIDUE PO4 A 1639 source : AC3 12) chain A residue 247 type sequence H description BINDING SITE FOR RESIDUE PO4 A 1639 source : AC3 13) chain A residue 329 type sequence H description BINDING SITE FOR RESIDUE PO4 A 1639 source : AC3 14) chain A residue 352 type sequence D description BINDING SITE FOR RESIDUE PO4 A 1639 source : AC3 15) chain A residue 579 type sequence H description BINDING SITE FOR RESIDUE PO4 A 1639 source : AC3 16) chain A residue 603 type sequence H description BINDING SITE FOR RESIDUE PO4 A 1639 source : AC3 17) chain A residue 135 type sequence R description BINDING SITE FOR RESIDUE PO4 A 1640 source : AC4 18) chain A residue 467 type sequence R description BINDING SITE FOR RESIDUE PO4 A 1640 source : AC4 19) chain A residue 468 type sequence D description BINDING SITE FOR RESIDUE PO4 A 1640 source : AC4 20) chain A residue 472 type sequence H description BINDING SITE FOR RESIDUE PO4 A 1640 source : AC4 21) chain B residue 472 type sequence H description BINDING SITE FOR RESIDUE PO4 A 1640 source : AC4 22) chain A residue 464 type sequence K description BINDING SITE FOR RESIDUE PO4 A 1641 source : AC5 23) chain A residue 467 type sequence R description BINDING SITE FOR RESIDUE PO4 A 1641 source : AC5 24) chain A residue 468 type sequence D description BINDING SITE FOR RESIDUE PO4 A 1641 source : AC5 25) chain B residue 472 type sequence H description BINDING SITE FOR RESIDUE PO4 A 1641 source : AC5 26) chain A residue 468 type sequence D description BINDING SITE FOR RESIDUE ZN A 1642 source : AC6 27) chain A residue 472 type sequence H description BINDING SITE FOR RESIDUE ZN A 1642 source : AC6 28) chain B residue 472 type sequence H description BINDING SITE FOR RESIDUE ZN A 1642 source : AC6 29) chain A residue 225 type sequence L description BINDING SITE FOR RESIDUE K A 1643 source : AC7 30) chain A residue 227 type sequence V description BINDING SITE FOR RESIDUE K A 1643 source : AC7 31) chain A residue 230 type sequence F description BINDING SITE FOR RESIDUE K A 1643 source : AC7 32) chain B residue 246 type sequence D description BINDING SITE FOR RESIDUE ZN B 1637 source : AC8 33) chain B residue 247 type sequence H description BINDING SITE FOR RESIDUE ZN B 1637 source : AC8 34) chain B residue 352 type sequence D description BINDING SITE FOR RESIDUE ZN B 1637 source : AC8 35) chain B residue 603 type sequence H description BINDING SITE FOR RESIDUE ZN B 1637 source : AC8 36) chain B residue 242 type sequence H description BINDING SITE FOR RESIDUE ZN B 1638 source : AC9 37) chain B residue 244 type sequence H description BINDING SITE FOR RESIDUE ZN B 1638 source : AC9 38) chain B residue 329 type sequence H description BINDING SITE FOR RESIDUE ZN B 1638 source : AC9 39) chain B residue 352 type sequence D description BINDING SITE FOR RESIDUE ZN B 1638 source : AC9 40) chain B residue 242 type sequence H description BINDING SITE FOR RESIDUE PO4 B 1639 source : BC1 41) chain B residue 244 type sequence H description BINDING SITE FOR RESIDUE PO4 B 1639 source : BC1 42) chain B residue 246 type sequence D description BINDING SITE FOR RESIDUE PO4 B 1639 source : BC1 43) chain B residue 247 type sequence H description BINDING SITE FOR RESIDUE PO4 B 1639 source : BC1 44) chain B residue 329 type sequence H description BINDING SITE FOR RESIDUE PO4 B 1639 source : BC1 45) chain B residue 352 type sequence D description BINDING SITE FOR RESIDUE PO4 B 1639 source : BC1 46) chain B residue 579 type sequence H description BINDING SITE FOR RESIDUE PO4 B 1639 source : BC1 47) chain B residue 603 type sequence H description BINDING SITE FOR RESIDUE PO4 B 1639 source : BC1 48) chain B residue 225 type sequence L description BINDING SITE FOR RESIDUE K B 1640 source : BC2 49) chain B residue 227 type sequence V description BINDING SITE FOR RESIDUE K B 1640 source : BC2 50) chain B residue 230 type sequence F description BINDING SITE FOR RESIDUE K B 1640 source : BC2 51) chain A residue 242 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 52) chain B residue 246 type BINDING sequence D description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 53) chain B residue 247 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 54) chain B residue 329 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 55) chain B residue 352 type BINDING sequence D description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 56) chain B residue 603 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 57) chain A residue 244 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 58) chain A residue 246 type BINDING sequence D description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 59) chain A residue 247 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 60) chain A residue 329 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 61) chain A residue 352 type BINDING sequence D description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 62) chain A residue 603 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 63) chain B residue 242 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1 64) chain B residue 244 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB source Swiss-Prot : SWS_FT_FI1

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