eF-site ID 2y4m-AB
PDB Code 2y4m
Chain A, B

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Title MANNOSYLGLYCERATE SYNTHASE IN COMPLEX WITH GDP-Mannose
Classification TRANSFERASE
Compound MANNOSYLGLYCERATE SYNTHASE
Source Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis) (D0MI02_RHOM4)
Sequence A:  SLVVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQ
TYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMN
TALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG
YGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQ
PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVA
AGVSIYECYIPEGKAHRLLDDLRTMLVECFAAIQSLQHEV
VGQPAIHRQEHPHRVPVHIAERVGYDVEATLHRLMQHWTP
RQVELLELFTTPVREGLRTCQRRPAFNFMDEMAWAATYHV
LLEHFQPGDPDWEELLFKLWTTRVLNYTMTVALRGYDYAQ
QYLYRMLGRYRYQAALE
B:  SLVVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQ
TYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMN
TALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG
YGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQ
PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVA
AGVSIYECYIPEGKAHRLYGGLDDLRTMLVECFAAIQSLQ
HEVVGQPAIHRQEHPHRVPVHIAERVGYDVEATLHRLMQH
WTPRQVELLELFTTPVREGLRTCQRRPAFNFMDEMAWAAT
YHVLLEHFQPGDPDWEELLFKLWTTRVLNYTMTVALRGYD
YAQQYLYRMLGRYRYQAALE
Description


Functional site

1) chain A
residue 102
type
sequence D
description BINDING SITE FOR RESIDUE MG A 400
source : AC1

2) chain A
residue 217
type
sequence H
description BINDING SITE FOR RESIDUE MG A 400
source : AC1

3) chain A
residue 7
type
sequence P
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

4) chain A
residue 8
type
sequence F
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

5) chain A
residue 9
type
sequence K
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

6) chain A
residue 11
type
sequence E
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

7) chain A
residue 35
type
sequence I
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

8) chain A
residue 37
type
sequence Y
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

9) chain A
residue 66
type
sequence Q
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

10) chain A
residue 75
type
sequence G
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

11) chain A
residue 76
type
sequence K
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

12) chain A
residue 100
type
sequence D
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

13) chain A
residue 101
type
sequence A
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

14) chain A
residue 102
type
sequence D
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

15) chain A
residue 163
type
sequence L
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

16) chain A
residue 164
type
sequence G
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

17) chain A
residue 165
type
sequence G
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

18) chain A
residue 189
type
sequence W
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

19) chain A
residue 192
type
sequence D
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

20) chain A
residue 215
type
sequence K
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

21) chain A
residue 217
type
sequence H
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

22) chain A
residue 218
type
sequence R
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

23) chain A
residue 229
type
sequence M
description BINDING SITE FOR RESIDUE GDX A 401
source : AC2

24) chain A
residue 136
type
sequence A
description BINDING SITE FOR RESIDUE CL A 402
source : AC3

25) chain A
residue 138
type
sequence I
description BINDING SITE FOR RESIDUE CL A 402
source : AC3

26) chain A
residue 139
type
sequence T
description BINDING SITE FOR RESIDUE CL A 402
source : AC3

27) chain A
residue 29
type
sequence V
description BINDING SITE FOR RESIDUE EDO A 501
source : AC4

28) chain A
residue 57
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 501
source : AC4

29) chain A
residue 59
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 501
source : AC4

30) chain A
residue 269
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 503
source : AC5

31) chain A
residue 271
type
sequence V
description BINDING SITE FOR RESIDUE EDO A 503
source : AC5

32) chain A
residue 376
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 504
source : AC6

33) chain B
residue 116
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 504
source : AC6

34) chain A
residue 155
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 505
source : AC7

35) chain A
residue 251
type
sequence H
description BINDING SITE FOR RESIDUE EDO A 505
source : AC7

36) chain B
residue 155
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 505
source : AC7

37) chain B
residue 250
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 505
source : AC7

38) chain B
residue 251
type
sequence H
description BINDING SITE FOR RESIDUE EDO A 505
source : AC7

39) chain A
residue 314
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 506
source : AC8

40) chain A
residue 315
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 506
source : AC8

41) chain A
residue 347
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 506
source : AC8

42) chain A
residue 350
type
sequence N
description BINDING SITE FOR RESIDUE EDO A 506
source : AC8

43) chain A
residue 354
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 506
source : AC8

44) chain A
residue 366
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 506
source : AC8

45) chain A
residue 131
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 507
source : AC9

46) chain A
residue 132
type
sequence A
description BINDING SITE FOR RESIDUE EDO A 507
source : AC9

47) chain A
residue 135
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 507
source : AC9

48) chain A
residue 140
type
sequence W
description BINDING SITE FOR RESIDUE EDO A 507
source : AC9

49) chain A
residue 364
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 507
source : AC9

50) chain A
residue 120
type
sequence F
description BINDING SITE FOR RESIDUE EDO A 508
source : BC1

51) chain A
residue 121
type
sequence G
description BINDING SITE FOR RESIDUE EDO A 508
source : BC1

52) chain A
residue 122
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 508
source : BC1

53) chain A
residue 252
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 508
source : BC1

54) chain B
residue 153
type
sequence H
description BINDING SITE FOR RESIDUE EDO A 508
source : BC1

55) chain B
residue 102
type
sequence D
description BINDING SITE FOR RESIDUE MG B 400
source : BC2

56) chain B
residue 217
type
sequence H
description BINDING SITE FOR RESIDUE MG B 400
source : BC2

57) chain B
residue 7
type
sequence P
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

58) chain B
residue 8
type
sequence F
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

59) chain B
residue 9
type
sequence K
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

60) chain B
residue 11
type
sequence E
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

61) chain B
residue 35
type
sequence I
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

62) chain B
residue 37
type
sequence Y
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

63) chain B
residue 66
type
sequence Q
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

64) chain B
residue 75
type
sequence G
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

65) chain B
residue 76
type
sequence K
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

66) chain B
residue 100
type
sequence D
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

67) chain B
residue 101
type
sequence A
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

68) chain B
residue 102
type
sequence D
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

69) chain B
residue 163
type
sequence L
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

70) chain B
residue 165
type
sequence G
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

71) chain B
residue 189
type
sequence W
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

72) chain B
residue 192
type
sequence D
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

73) chain B
residue 215
type
sequence K
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

74) chain B
residue 217
type
sequence H
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

75) chain B
residue 229
type
sequence M
description BINDING SITE FOR RESIDUE GDX B 401
source : BC3

76) chain B
residue 136
type
sequence A
description BINDING SITE FOR RESIDUE CL B 402
source : BC4

77) chain B
residue 138
type
sequence I
description BINDING SITE FOR RESIDUE CL B 402
source : BC4

78) chain B
residue 139
type
sequence T
description BINDING SITE FOR RESIDUE CL B 402
source : BC4

79) chain A
residue 71
type
sequence T
description BINDING SITE FOR RESIDUE EDO B 501
source : BC5

80) chain A
residue 185
type
sequence R
description BINDING SITE FOR RESIDUE EDO B 501
source : BC5

81) chain B
residue 281
type
sequence H
description BINDING SITE FOR RESIDUE EDO B 501
source : BC5

82) chain B
residue 286
type
sequence Q
description BINDING SITE FOR RESIDUE EDO B 501
source : BC5

83) chain B
residue 335
type
sequence D
description BINDING SITE FOR RESIDUE EDO B 501
source : BC5

84) chain A
residue 272
type
sequence E
description BINDING SITE FOR RESIDUE EDO B 503
source : BC6

85) chain B
residue 309
type
sequence A
description BINDING SITE FOR RESIDUE EDO B 503
source : BC6

86) chain B
residue 311
type
sequence N
description BINDING SITE FOR RESIDUE EDO B 503
source : BC6

87) chain B
residue 312
type
sequence F
description BINDING SITE FOR RESIDUE EDO B 503
source : BC6


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