eF-site ID 2y2k-A
PDB Code 2y2k
Chain A

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Title PENICILLIN-BINDING PROTEIN 1B (PBP-1B) IN COMPLEX WITH AN ALKYL BORONATE (ZA5)
Classification TRANSFERASE
Compound PENICILLIN-BINDING PROTEIN 1B
Source Streptococcus pneumoniae (strain ATCC BAA-255 / R6) (Q7CRA4_STRR6)
Sequence A:  SEITYSDGTVIASIRDYLYFTTLAEAQERMYDYLAQRDNV
SAKELKNEATQKFYRDLAAKEIENGGYKITTTIDQKIHSA
MQSAVADYGYLLDDGTGRVEVGNVLMDNQTGAILGFVGGR
NYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSET
ILSNYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPA
YWTYRMLRENGVDVKGYMEKMGYEIPEYGIESLPMGGGIE
VTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVVYEYQ
DKPVQVYSKATATIMQGLLREVLSSRVTTTFKSNLTSLNP
TLANADWIGKTGTTGQDENMWLMLSTPRLTLGGWIGHDDN
HSLSQQAGYSNNSNYMAHLVNAIQQASPSIWGNERFALDP
SVVKSEVLKSTGQKPGKVSVEGKEVEVTGSTVTSYWANKS
GAPATSYRFAIGGSDADYQNAWSSIVGSL
Description


Functional site

1) chain A
residue 459
type
sequence A
description BINDING SITE FOR RESIDUE ZA5 A 1000
source : AC1

2) chain A
residue 460
type
sequence S
description BINDING SITE FOR RESIDUE ZA5 A 1000
source : AC1

3) chain A
residue 463
type
sequence K
description BINDING SITE FOR RESIDUE ZA5 A 1000
source : AC1

4) chain A
residue 516
type
sequence S
description BINDING SITE FOR RESIDUE ZA5 A 1000
source : AC1

5) chain A
residue 518
type
sequence N
description BINDING SITE FOR RESIDUE ZA5 A 1000
source : AC1

6) chain A
residue 556
type
sequence M
description BINDING SITE FOR RESIDUE ZA5 A 1000
source : AC1

7) chain A
residue 653
type
sequence G
description BINDING SITE FOR RESIDUE ZA5 A 1000
source : AC1

8) chain A
residue 654
type
sequence T
description BINDING SITE FOR RESIDUE ZA5 A 1000
source : AC1

9) chain A
residue 655
type
sequence T
description BINDING SITE FOR RESIDUE ZA5 A 1000
source : AC1

10) chain A
residue 563
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 1100
source : AC2

11) chain A
residue 583
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1100
source : AC2

12) chain A
residue 529
type
sequence R
description BINDING SITE FOR RESIDUE CL A 1200
source : AC3

13) chain A
residue 529
type
sequence R
description BINDING SITE FOR RESIDUE CL A 1200
source : AC3

14) chain A
residue 535
type
sequence V
description BINDING SITE FOR RESIDUE CL A 1201
source : AC4

15) chain A
residue 536
type
sequence K
description BINDING SITE FOR RESIDUE CL A 1201
source : AC4

16) chain A
residue 625
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1202
source : AC5

17) chain A
residue 627
type
sequence R
description BINDING SITE FOR RESIDUE CL A 1202
source : AC5

18) chain A
residue 633
type
sequence K
description BINDING SITE FOR RESIDUE CL A 1202
source : AC5

19) chain A
residue 759
type
sequence N
description BINDING SITE FOR RESIDUE CL A 1203
source : AC6

20) chain A
residue 760
type
sequence K
description BINDING SITE FOR RESIDUE CL A 1203
source : AC6

21) chain A
residue 761
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1203
source : AC6

22) chain A
residue 591
type
sequence A
description BINDING SITE FOR RESIDUE CL A 1206
source : AC7

23) chain A
residue 592
type
sequence A
description BINDING SITE FOR RESIDUE CL A 1206
source : AC7

24) chain A
residue 593
type
sequence D
description BINDING SITE FOR RESIDUE CL A 1206
source : AC7

25) chain A
residue 595
type
sequence R
description BINDING SITE FOR RESIDUE CL A 1206
source : AC7

26) chain A
residue 726
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1208
source : AC8

27) chain A
residue 727
type
sequence E
description BINDING SITE FOR RESIDUE CL A 1208
source : AC8

28) chain A
residue 544
type
sequence Y
description BINDING SITE FOR RESIDUE CL A 1211
source : AC9

29) chain A
residue 545
type
sequence E
description BINDING SITE FOR RESIDUE CL A 1211
source : AC9

30) chain A
residue 346
type
sequence E
description BINDING SITE FOR RESIDUE CL A 1212
source : BC1

31) chain A
residue 584
type
sequence H
description BINDING SITE FOR RESIDUE CL A 1212
source : BC1

32) chain A
residue 585
type
sequence V
description BINDING SITE FOR RESIDUE CL A 1212
source : BC1

33) chain A
residue 586
type
sequence I
description BINDING SITE FOR RESIDUE CL A 1212
source : BC1

34) chain A
residue 337
type
sequence D
description BINDING SITE FOR RESIDUE CL A 1213
source : BC2

35) chain A
residue 338
type
sequence Y
description BINDING SITE FOR RESIDUE CL A 1213
source : BC2

36) chain A
residue 339
type
sequence L
description BINDING SITE FOR RESIDUE CL A 1213
source : BC2

37) chain A
residue 399
type
sequence H
description BINDING SITE FOR RESIDUE CL A 1213
source : BC2

38) chain A
residue 403
type
sequence Q
description BINDING SITE FOR RESIDUE CL A 1213
source : BC2

39) chain A
residue 609
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1214
source : BC3

40) chain A
residue 610
type
sequence K
description BINDING SITE FOR RESIDUE CL A 1214
source : BC3

41) chain A
residue 110
type
sequence Y
description BINDING SITE FOR RESIDUE CL A 1216
source : BC4

42) chain A
residue 111
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1216
source : BC4

43) chain A
residue 395
type
sequence D
description BINDING SITE FOR RESIDUE CL A 1216
source : BC4

44) chain A
residue 396
type
sequence Q
description BINDING SITE FOR RESIDUE CL A 1216
source : BC4

45) chain A
residue 729
type
sequence L
description BINDING SITE FOR RESIDUE CL A 1217
source : BC5

46) chain A
residue 730
type
sequence K
description BINDING SITE FOR RESIDUE CL A 1217
source : BC5

47) chain A
residue 731
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1217
source : BC5

48) chain A
residue 751
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1217
source : BC5

49) chain A
residue 342
type
sequence T
description BINDING SITE FOR RESIDUE CL A 1224
source : BC6

50) chain A
residue 449
type
sequence N
description BINDING SITE FOR RESIDUE CL A 1224
source : BC6

51) chain A
residue 679
type
sequence D
description BINDING SITE FOR RESIDUE CL A 1229
source : BC7

52) chain A
residue 680
type
sequence D
description BINDING SITE FOR RESIDUE CL A 1229
source : BC7

53) chain A
residue 753
type
sequence V
description BINDING SITE FOR RESIDUE CL A 1237
source : BC8

54) chain A
residue 754
type
sequence T
description BINDING SITE FOR RESIDUE CL A 1237
source : BC8

55) chain A
residue 652
type
sequence T
description BINDING SITE FOR RESIDUE NA A 1300
source : BC9

56) chain A
residue 653
type
sequence G
description BINDING SITE FOR RESIDUE NA A 1300
source : BC9

57) chain A
residue 654
type
sequence T
description BINDING SITE FOR RESIDUE NA A 1300
source : BC9

58) chain A
residue 619
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 1400
source : CC1

59) chain A
residue 622
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 1400
source : CC1

60) chain A
residue 756
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 1400
source : CC1

61) chain A
residue 634
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1791
source : CC2

62) chain A
residue 634
type
sequence S
description BINDING SITE FOR RESIDUE CL A 1791
source : CC2

63) chain A
residue 492
type
sequence N
description BINDING SITE FOR RESIDUE CL A 1792
source : CC3

64) chain A
residue 492
type
sequence N
description BINDING SITE FOR RESIDUE CL A 1792
source : CC3

65) chain A
residue 494
type
sequence N
description BINDING SITE FOR RESIDUE CL A 1792
source : CC3

66) chain A
residue 494
type
sequence N
description BINDING SITE FOR RESIDUE CL A 1792
source : CC3


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