eF-site ID 2xxz-A
PDB Code 2xxz
Chain A

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Title Crystal structure of the human JMJD3 jumonji domain
Classification OXIDOREDUCTASE
Compound LYSINE-SPECIFIC DEMETHYLASE 6B
Source Homo sapiens (Human) (KDM6B_HUMAN)
Sequence A:  REKLNPPTPSIYLESKRDAFSPVLLQFCTDPRNPITVIRG
LAGSLRLNLGLFSTKTLVEASGEHTVEVRTQVQQPSDENW
DLTGTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEEHH
IIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVTSTGNMLS
HVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIG
PGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILDDL
YASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWN
VGPLTAYQYQLA
Description (1)  LYSINE-SPECIFIC DEMETHYLASE 6B (E.C.1.14.11.-)


Functional site

1) chain A
residue 1387
type
sequence H
description BINDING SITE FOR RESIDUE NI A 2494
source : AC1

2) chain A
residue 1389
type
sequence E
description BINDING SITE FOR RESIDUE NI A 2494
source : AC1

3) chain A
residue 1287
type
sequence E
description BINDING SITE FOR RESIDUE NA A 2495
source : AC4

4) chain A
residue 1185
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 2496
source : AC5

5) chain A
residue 1186
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 2496
source : AC5

6) chain A
residue 1204
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 2497
source : AC6

7) chain A
residue 1489
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 2497
source : AC6

8) chain A
residue 1330
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 2498
source : AC7

9) chain A
residue 1370
type
sequence M
description BINDING SITE FOR RESIDUE EDO A 2498
source : AC7

10) chain A
residue 1191
type
sequence R
description BINDING SITE FOR RESIDUE EDO B 2501
source : AC8

11) chain A
residue 1227
type
sequence S
description BINDING SITE FOR RESIDUE EDO A 2499
source : AC9

12) chain A
residue 1228
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 2499
source : AC9

13) chain A
residue 1401
type
sequence G
description BINDING SITE FOR RESIDUE EDO A 2499
source : AC9

14) chain A
residue 1476
type
sequence N
description BINDING SITE FOR RESIDUE EDO A 2499
source : AC9

15) chain A
residue 1376
type
sequence Y
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

16) chain A
residue 1378
type
sequence K
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

17) chain A
residue 1384
type
sequence T
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

18) chain A
residue 1387
type
sequence H
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

19) chain A
residue 1389
type
sequence E
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

20) chain A
residue 1397
type
sequence N
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

21) chain A
residue 1407
type
sequence W
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

22) chain A
residue 1461
type
sequence I
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

23) chain A
residue 1467
type
sequence H
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

24) chain A
residue 1477
type
sequence N
description BINDING SITE FOR RESIDUE 8XQ A 3001
source : BC1

25) chain A
residue 1470
type BINDING
sequence Q
description BINDING => ECO:0000250|UniProtKB:O14607
source Swiss-Prot : SWS_FT_FI2

26) chain A
residue 1390
type BINDING
sequence N
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

27) chain A
residue 1392
type BINDING
sequence N
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI1


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