|
eF-site ID
|
2xkk-ACEF |
PDB Code
|
2xkk |
Chain
|
A, C, E, F |
|
click to enlarge
|
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Title
|
CRYSTAL STRUCTURE OF MOXIFLOXACIN, DNA, and A. BAUMANNII TOPO IV (PARE-PARC FUSION TRUNCATE) |
Classification
|
ISOMERASE/DNA/ANTIBIOTIC |
Compound
|
TOPOISOMERASE IV |
Source
|
Acinetobacter baumannii (strain SDF) (2XKK) |
|
Sequence
|
A: |
ALPGKLTREESELFIVEGDSAGGSAKQARDKNFQAIMPIR
GKILNTWEVSSDEVLASQEVHDIAIAIGVDPGSDDLSELR
YGKICILADADSDGLHIATLLCALFVKHFPALVEEGHLYV
AMPPLFRIDIGKDVHYALDDEELETILKNVKNPQITRFKG
LGEMNAIQLRETTMDPNTRRLVQLDLDDAHLTAGLLDKLL
AKKRAADRKQWLEQKENRSVAEFTEQAYLNYAMYVIMDRA
LPHISDGLKPVQRRIVYAMSELGLKSSGKPKKSARTVGDV
LGKYHPHGDSACYEAMVLMAQPFSYRYPLIEGQGNWGSPD
DPKSFAAMRXTEAKLSAYSELLLSELGQGTSEWQDNFDGS
LKEPITLPARVPNILLNGTTGIAVGMATDIPPHNLREVVK
GTIALIRNPQTSDEKLAEYIPAPDLPTKAEIITPPEELLK
IQTTGRGSYRMRAVYTIEKNEIVITELPYQVSGSKVITQI
ADQMQAKKLPLVVDVRDESDHENPTRLVIVLRSNRIDAEA
VMSHLFATTDLESSYRVNLNMIGEDGRPQVKSIRRILLEW
IEIRKKTVTRRLQYHLNRIEKRLHILAGLLIAYLDIDTVI
RIIREEDQPKPVLMEHFNIDEIQAEAILELKLRHLAKLEE
MEIRHEQDELSAKAAIIREQLENPESLKNLIISELKEDAK
KFGDERRSPIVA
|
C: |
ERKKIVSGPALPGKLADCVGQTREESELFIVEGDSAGGSA
KQARDKNFQAIMPIRGKILNTWEVSSDEVLASQEVHDIAI
AIGVDPGSDDLSELRYGKICILADADSDGLHIATLLCALF
VKHFPALVEEGHLYVAMPPLFRIDIGKDVHYALDDEELET
ILKNVKNPQITRFKGLGEMNAIQLRETTMDPNTRRLVQLD
LDDAHLTAGLLDKLLAKKRAADRKQWLEQKGATENRSVAE
FTEQAYLNYAMYVIMDRALPHISDGLKPVQRRIVYAMSEL
GLKSSGKPKKSARTVGDVLGKYHPHGDSACYEAMVLMAQP
FSYRYPLIEGQGNWGSPDDPKSFAAMRXTEAKLSAYSELL
LSELGQGTSEWQDNFDGSLKEPITLPARVPNILLNGTTGI
AVGMATDIPPHNLREVVKGTIALIRNPQTSDEKLAEYIPA
PDLPTKAEIITPPEELLKIQTTGRGSYRMRAVYTIEKNEI
VITELPYQVSGSKVITQIADQMQAKKLPLVVDVRDESDHE
NPTRLVIVLRSNRIDAEAVMSHLFATTDLESSYRVNLNMI
GEDGRPQVKSIRRILLEWIEIRKKTVTRRLQYHLNRIEKR
LHILAGLLIAYLDIDTVIRIIREEDQPKPVLMEHFNIDEI
QAEAILELKLRHLAKLEEMEIRHEQDELSAKAAIIREQLE
NPESLKNLIISELKEDAKKFGDERRSPIVAR
|
E: |
GGTCATGAATGACTATGCACGTAAAA
|
F: |
TTTACGTGCATAGTCATTCATGACCT
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
467 |
type |
|
sequence |
D
|
description |
BINDING SITE FOR RESIDUE MG A 2487
|
source |
: AC2
|
|
2)
|
chain |
A |
residue |
469 |
type |
|
sequence |
D
|
description |
BINDING SITE FOR RESIDUE MG A 2487
|
source |
: AC2
|
|
3)
|
chain |
C |
residue |
467 |
type |
|
sequence |
D
|
description |
BINDING SITE FOR RESIDUE MG C 2488
|
source |
: AC4
|
|
4)
|
chain |
C |
residue |
469 |
type |
|
sequence |
D
|
description |
BINDING SITE FOR RESIDUE MG C 2488
|
source |
: AC4
|
|
5)
|
chain |
A |
residue |
1124 |
type |
|
sequence |
X
|
description |
BINDING SITE FOR RESIDUE MFX E 1100
|
source |
: AC5
|
|
6)
|
chain |
E |
residue |
19 |
type |
|
sequence |
T
|
description |
BINDING SITE FOR RESIDUE MFX E 1100
|
source |
: AC5
|
|
7)
|
chain |
E |
residue |
20 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR RESIDUE MFX E 1100
|
source |
: AC5
|
|
8)
|
chain |
F |
residue |
15 |
type |
|
sequence |
T
|
description |
BINDING SITE FOR RESIDUE MFX E 1100
|
source |
: AC5
|
|
9)
|
chain |
F |
residue |
16 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR RESIDUE MFX E 1100
|
source |
: AC5
|
|
10)
|
chain |
A |
residue |
393-401 |
type |
prosite |
sequence |
IVEGDSAGG
|
description |
TOPOISOMERASE_II DNA topoisomerase II signature. IVEGDSAGG
|
source |
prosite : PS00177
|
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