eF-site ID 2xew-I
PDB Code 2xew
Chain I

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Title Crystal structure of K11-linked diubiquitin
Classification CELL CYCLE
Compound UBIQUITIN
Source (UBIQ_HUMAN)
Sequence I:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Description


Functional site

1) chain I
residue 44
type
sequence I
description BINDING SITE FOR RESIDUE EDO I 1077
source : BC8

2) chain I
residue 45
type
sequence F
description BINDING SITE FOR RESIDUE EDO I 1077
source : BC8

3) chain I
residue 46
type
sequence A
description BINDING SITE FOR RESIDUE EDO I 1077
source : BC8

4) chain I
residue 47
type
sequence G
description BINDING SITE FOR RESIDUE EDO I 1077
source : BC8

5) chain I
residue 68
type
sequence H
description BINDING SITE FOR RESIDUE EDO I 1077
source : BC8

6) chain I
residue 42
type
sequence R
description BINDING SITE FOR RESIDUE CL I 1078
source : BC9

7) chain I
residue 70
type
sequence V
description BINDING SITE FOR RESIDUE EDO L 1075
source : CC3

8) chain I
residue 71
type
sequence L
description BINDING SITE FOR RESIDUE EDO L 1075
source : CC3

9) chain I
residue 7
type
sequence T
description BINDING SITE FOR RESIDUE EDO L 1076
source : CC4

10) chain I
residue 9
type
sequence T
description BINDING SITE FOR RESIDUE EDO L 1076
source : CC4

11) chain I
residue 11
type
sequence K
description BINDING SITE FOR RESIDUE EDO L 1076
source : CC4

12) chain I
residue 16
type
sequence E
description BINDING SITE FOR RESIDUE CL L 1080
source : CC8

13) chain I
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE CL L 1080
source : CC8

14) chain I
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

15) chain I
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

16) chain I
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

17) chain I
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000269|PubMed:24660806, ECO:0000269|PubMed:24751536, ECO:0000269|PubMed:24784582, ECO:0000269|PubMed:25527291
source Swiss-Prot : SWS_FT_FI3

18) chain I
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:18719106
source Swiss-Prot : SWS_FT_FI12

19) chain I
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:25752573, ECO:0000269|PubMed:25752577, ECO:0000269|PubMed:34239127
source Swiss-Prot : SWS_FT_FI10

20) chain I
residue 66
type MOD_RES
sequence T
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

21) chain I
residue 76
type MOD_RES
sequence G
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI5

22) chain I
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603
source Swiss-Prot : SWS_FT_FI6

23) chain I
residue 76
type CROSSLNK
sequence G
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7

24) chain I
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8

25) chain I
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8

26) chain I
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:25752577
source Swiss-Prot : SWS_FT_FI11

27) chain I
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860
source Swiss-Prot : SWS_FT_FI9


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