eF-site ID 2xew-C
PDB Code 2xew
Chain C

click to enlarge
Title Crystal structure of K11-linked diubiquitin
Classification CELL CYCLE
Compound UBIQUITIN
Source (UBIQ_HUMAN)
Sequence C:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
Description


Functional site

1) chain C
residue 15
type
sequence L
description BINDING SITE FOR RESIDUE EDO C 1075
source : AC8

2) chain C
residue 16
type
sequence E
description BINDING SITE FOR RESIDUE EDO C 1075
source : AC8

3) chain C
residue 29
type
sequence K
description BINDING SITE FOR RESIDUE EDO C 1075
source : AC8

4) chain C
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE EDO C 1075
source : AC8

5) chain C
residue 2
type
sequence Q
description BINDING SITE FOR RESIDUE CL C 1076
source : AC9

6) chain C
residue 63
type
sequence K
description BINDING SITE FOR RESIDUE CL C 1076
source : AC9

7) chain C
residue 7
type
sequence T
description BINDING SITE FOR RESIDUE EDO E 1077
source : BC3

8) chain C
residue 9
type
sequence T
description BINDING SITE FOR RESIDUE EDO E 1077
source : BC3

9) chain C
residue 45
type
sequence F
description BINDING SITE FOR RESIDUE EDO I 1077
source : BC8

10) chain C
residue 65
type
sequence S
description BINDING SITE FOR RESIDUE EDO I 1077
source : BC8

11) chain C
residue 66
type
sequence T
description BINDING SITE FOR RESIDUE EDO I 1077
source : BC8

12) chain C
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000269|PubMed:24660806, ECO:0000269|PubMed:24751536, ECO:0000269|PubMed:24784582, ECO:0000269|PubMed:25527291
source Swiss-Prot : SWS_FT_FI3

13) chain C
residue 66
type MOD_RES
sequence T
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

14) chain C
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

15) chain C
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

16) chain C
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

17) chain C
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603
source Swiss-Prot : SWS_FT_FI6

18) chain C
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:18719106
source Swiss-Prot : SWS_FT_FI12

19) chain C
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:25752573, ECO:0000269|PubMed:25752577, ECO:0000269|PubMed:34239127
source Swiss-Prot : SWS_FT_FI10

20) chain C
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:25752577
source Swiss-Prot : SWS_FT_FI11

21) chain C
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860
source Swiss-Prot : SWS_FT_FI9

22) chain C
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8

23) chain C
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8


Display surface

Download
Links