eF-site ID 2xck-A
PDB Code 2xck
Chain A

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Title Crystal structure of PDK1 in complex with a pyrazoloquinazoline inhibitor
Classification TRANSFERASE
Compound 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE 1
Source Homo sapiens (Human) (PDPK1_HUMAN)
Sequence A:  KKRPEDFKFGKILGEGSFSTTVLARELATSREYAIKILEK
RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL
YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY
LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSNXFV
GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR
AGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK
RLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT
Description


Functional site

1) chain A
residue 103
type
sequence A
description BINDING SITE FOR RESIDUE GOL A 1361
source : AC1

2) chain A
residue 104
type
sequence T
description BINDING SITE FOR RESIDUE GOL A 1361
source : AC1

3) chain A
residue 139
type
sequence H
description BINDING SITE FOR RESIDUE GOL A 1361
source : AC1

4) chain A
residue 191
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 1361
source : AC1

5) chain A
residue 347
type
sequence W
description BINDING SITE FOR RESIDUE GOL A 1361
source : AC1

6) chain A
residue 348
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1361
source : AC1

7) chain A
residue 349
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 1361
source : AC1

8) chain A
residue 350
type
sequence L
description BINDING SITE FOR RESIDUE GOL A 1361
source : AC1

9) chain A
residue 351
type
sequence H
description BINDING SITE FOR RESIDUE GOL A 1361
source : AC1

10) chain A
residue 82
type
sequence F
description BINDING SITE FOR RESIDUE GOL A 1362
source : AC2

11) chain A
residue 83
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 1362
source : AC2

12) chain A
residue 84
type
sequence F
description BINDING SITE FOR RESIDUE GOL A 1362
source : AC2

13) chain A
residue 194
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1362
source : AC2

14) chain A
residue 334
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 1362
source : AC2

15) chain A
residue 337
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 1362
source : AC2

16) chain A
residue 106
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 1363
source : AC3

17) chain A
residue 107
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1363
source : AC3

18) chain A
residue 146
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 1363
source : AC3

19) chain A
residue 160
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 1363
source : AC3

20) chain A
residue 161
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 1363
source : AC3

21) chain A
residue 106
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 1365
source : AC4

22) chain A
residue 107
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 1365
source : AC4

23) chain A
residue 351
type
sequence H
description BINDING SITE FOR RESIDUE GOL A 1365
source : AC4

24) chain A
residue 352
type
sequence Q
description BINDING SITE FOR RESIDUE GOL A 1365
source : AC4

25) chain A
residue 76
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1368
source : AC5

26) chain A
residue 131
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1368
source : AC5

27) chain A
residue 148
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 1368
source : AC5

28) chain A
residue 149
type
sequence F
description BINDING SITE FOR RESIDUE SO4 A 1368
source : AC5

29) chain A
residue 150
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 1368
source : AC5

30) chain A
residue 144
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1369
source : AC6

31) chain A
residue 144
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1369
source : AC6

32) chain A
residue 146
type
sequence Y
description BINDING SITE FOR RESIDUE SO4 A 1369
source : AC6

33) chain A
residue 146
type
sequence Y
description BINDING SITE FOR RESIDUE SO4 A 1369
source : AC6

34) chain A
residue 106
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1370
source : AC7

35) chain A
residue 351
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 1370
source : AC7

36) chain A
residue 88
type
sequence L
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

37) chain A
residue 91
type
sequence G
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

38) chain A
residue 94
type
sequence S
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

39) chain A
residue 109
type
sequence A
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

40) chain A
residue 111
type
sequence K
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

41) chain A
residue 159
type
sequence L
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

42) chain A
residue 160
type
sequence S
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

43) chain A
residue 162
type
sequence A
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

44) chain A
residue 212
type
sequence L
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

45) chain A
residue 222
type
sequence T
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

46) chain A
residue 223
type
sequence D
description BINDING SITE FOR RESIDUE MH4 A 1360
source : AC8

47) chain A
residue 255
type ACT_SITE
sequence T
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10027
source Swiss-Prot : SWS_FT_FI1

48) chain A
residue 142
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:12169624, ECO:0000269|PubMed:15741170, ECO:0000269|PubMed:22999883
source Swiss-Prot : SWS_FT_FI2

49) chain A
residue 161
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:12169624, ECO:0000269|PubMed:15741170, ECO:0000269|PubMed:22999883
source Swiss-Prot : SWS_FT_FI2

50) chain A
residue 210
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:12169624, ECO:0000269|PubMed:15741170, ECO:0000269|PubMed:22999883
source Swiss-Prot : SWS_FT_FI2

51) chain A
residue 216
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12169624, ECO:0000269|PubMed:15741170, ECO:0000269|PubMed:22999883
source Swiss-Prot : SWS_FT_FI2

52) chain A
residue 273
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:12169624, ECO:0000269|PubMed:15741170, ECO:0000269|PubMed:22999883
source Swiss-Prot : SWS_FT_FI2

53) chain A
residue 259
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:22999883
source Swiss-Prot : SWS_FT_FI3

54) chain A
residue 291
type MOD_RES
sequence F
description Phosphoserine; by autocatalysis => ECO:0000269|PubMed:10455013, ECO:0000269|PubMed:11481331, ECO:0000269|PubMed:15772071, ECO:0000269|PubMed:16780920, ECO:0000269|Ref.8
source Swiss-Prot : SWS_FT_FI6

55) chain A
residue 88-111
type prosite
sequence LGEGSFSTTVLARELATSREYAIK
description PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGEGSFSTTVlArelatsre..........YAIK
source prosite : PS00107

56) chain A
residue 201-213
type prosite
sequence IIHRDLKPENILL
description PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. IiHrDLKpeNILL
source prosite : PS00108

57) chain A
residue 354
type MOD_RES
sequence T
description N6-acetyllysine => ECO:0000250|UniProtKB:Q9Z2A0
source Swiss-Prot : SWS_FT_FI7


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