eF-site ID 2wc9-A
PDB Code 2wc9
Chain A

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Title Crystal structure of the g2p (large terminase) nuclease domain from the bacteriophage SPP1 with bound Mn
Classification VIRAL PROTEIN
Compound TERMINASE LARGE SUBUNIT
Source Bacillus phage SPP1 (Bacteriophage SPP1) (TERL_BPSPP)
Sequence A:  VVPFENLQIEEGIITDAEVARFDNIRQGLDFGYGPDPLAF
VRWHYDKRKNRIYAIDELVDHKVSLKRTADFVRKNKYESA
RIIADSSEPRSIDALKLEHGINRIEGAKKGPDSVEHGERW
LDELDAIVIDPLRTPNIAREFENIDYQTDKNGDPIPRLED
KDNHTIDATRYAFERDX
Description (1)  TERMINASE LARGE SUBUNIT


Functional site

1) chain A
residue 266
type
sequence D
description BINDING SITE FOR RESIDUE MN A 1413
source : AC1

2) chain A
residue 400
type
sequence H
description BINDING SITE FOR RESIDUE MN A 1413
source : AC1

3) chain A
residue 266
type
sequence D
description BINDING SITE FOR RESIDUE MN A 1414
source : AC2

4) chain A
residue 321
type
sequence D
description BINDING SITE FOR RESIDUE MN A 1414
source : AC2

5) chain A
residue 317
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1415
source : AC3

6) chain A
residue 411
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1415
source : AC3

7) chain A
residue 266
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_04145, ECO:0000269|PubMed:19444313
source Swiss-Prot : SWS_FT_FI1

8) chain A
residue 321
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_04145, ECO:0000269|PubMed:19444313
source Swiss-Prot : SWS_FT_FI1

9) chain A
residue 400
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_04145, ECO:0000269|PubMed:19444313
source Swiss-Prot : SWS_FT_FI1

10) chain A
residue 403
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_04145, ECO:0000269|PubMed:19444313
source Swiss-Prot : SWS_FT_FI1


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