eF-site ID 2vum-J
PDB Code 2vum
Chain J

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Title Alpha-amanitin inhibited complete RNA polymerase II elongation complex
Classification TRANSFERASE
Compound DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
Source ORGANISM_COMMON: BAKERS' YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
Sequence J:  MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLG
LKRYCCRRMILTHVDLIEKFLRYNP
Description


Functional site

1) chain J
residue 7
type
sequence C
description BINDING SITE FOR RESIDUE ZN J 1066
source : AC8

2) chain J
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE ZN J 1066
source : AC8

3) chain J
residue 45
type
sequence C
description BINDING SITE FOR RESIDUE ZN J 1066
source : AC8

4) chain J
residue 46
type
sequence C
description BINDING SITE FOR RESIDUE ZN J 1066
source : AC8

5) chain J
residue 2-11
type prosite
sequence IVPVRCFSCG
description RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
source prosite : PS01112

6) chain J
residue 10
type MOD_RES
sequence C
description (3R,4S)-4-hydroxyisoleucine; in form gamma-amanitin => ECO:0000269|PubMed:11805306
source Swiss-Prot : SWS_FT_FI1

7) chain J
residue 45
type MOD_RES
sequence C
description (3R,4S)-4-hydroxyisoleucine; in form gamma-amanitin => ECO:0000269|PubMed:11805306
source Swiss-Prot : SWS_FT_FI1

8) chain J
residue 46
type MOD_RES
sequence C
description (3R,4S)-4-hydroxyisoleucine; in form gamma-amanitin => ECO:0000269|PubMed:11805306
source Swiss-Prot : SWS_FT_FI1


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