eF-site ID 2vsr-B
PDB Code 2vsr
Chain B

click to enlarge
Title hPPARgamma Ligand binding domain in complex with 9-(S)-HODE
Classification RECEPTOR
Compound PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
Source Homo sapiens (Human) (PPARG_HUMAN)
Sequence B:  ESADLRALAKHLYDSYIKSFPLTKAKARAILTGKDKSPFV
IYDMNSLMMGEDKIKFKHITPKEVAIRIFQGCQFRSVEAV
QEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASL
MNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVK
FNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNL
LQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLL
QVIKKTHPLLQEIYK
Description


Functional site

1) chain B
residue 282
type
sequence F
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

2) chain B
residue 285
type
sequence C
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

3) chain B
residue 286
type
sequence Q
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

4) chain B
residue 288
type
sequence R
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

5) chain B
residue 289
type
sequence S
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

6) chain B
residue 326
type
sequence I
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

7) chain B
residue 327
type
sequence Y
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

8) chain B
residue 333
type
sequence L
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

9) chain B
residue 360
type
sequence F
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

10) chain B
residue 363
type
sequence F
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

11) chain B
residue 364
type
sequence M
description BINDING SITE FOR RESIDUE 9HO B 1476
source : AC3

12) chain B
residue 316
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

13) chain B
residue 353
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

14) chain B
residue 254
type CROSSLNK
sequence S
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links