|
eF-site ID
|
2vs8-BCDEGHIJLMNO |
PDB Code
|
2vs8 |
Chain
|
B, C, D, E, G, H, I, J, L, M, N, O |
|
click to enlarge
|
|
Title
|
The crystal structure of I-DmoI in complex with DNA and Mn |
Classification
|
DNA BINDING PROTEIN |
Compound
|
HOMING ENDONUCLEASE I-DMOI |
Source
|
(2VS8) |
|
Sequence
|
B: |
GCCTTGCCGGGTAA
|
C: |
GTTCCGGCGCG
|
D: |
CGCGCCGGAACTTAC
|
E: |
CCGGCAAGGC
|
G: |
GCCTTGCCGGGTAA
|
H: |
GTTCCGGCGCG
|
I: |
CGCGCCGGAACTTAC
|
J: |
CCGGCAAGGC
|
L: |
GCCTTGCCGGGTAA
|
M: |
GTTCCGGCGCG
|
N: |
CGCGCCGGAACTTAC
|
O: |
CCGGCAAGGC
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
B |
residue |
14 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR RESIDUE MN A1188
|
source |
: AC1
|
|
2)
|
chain |
E |
residue |
16 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE MN A1188
|
source |
: AC1
|
|
3)
|
chain |
C |
residue |
15 |
type |
|
sequence |
G
|
description |
BINDING SITE FOR RESIDUE MN A1189
|
source |
: AC2
|
|
4)
|
chain |
D |
residue |
15 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE MN A1189
|
source |
: AC2
|
|
5)
|
chain |
H |
residue |
15 |
type |
|
sequence |
G
|
description |
BINDING SITE FOR RESIDUE MN F1196
|
source |
: AC3
|
|
6)
|
chain |
I |
residue |
15 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE MN F1196
|
source |
: AC3
|
|
7)
|
chain |
G |
residue |
14 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR RESIDUE MN F1197
|
source |
: AC4
|
|
8)
|
chain |
J |
residue |
16 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE MN F1197
|
source |
: AC4
|
|
9)
|
chain |
L |
residue |
14 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR RESIDUE MN K1183
|
source |
: AC5
|
|
10)
|
chain |
O |
residue |
16 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE MN K1183
|
source |
: AC5
|
|
11)
|
chain |
M |
residue |
15 |
type |
|
sequence |
G
|
description |
BINDING SITE FOR RESIDUE MN K1184
|
source |
: AC6
|
|
12)
|
chain |
N |
residue |
15 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE MN K1184
|
source |
: AC6
|
|
|
|