eF-site ID 2vs8-ABCDEFGHIJKLMNO
PDB Code 2vs8
Chain A, B, C, D, E, F, G, H, I, J, K, L, M, N, O

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Title The crystal structure of I-DmoI in complex with DNA and Mn
Classification DNA BINDING PROTEIN
Compound HOMING ENDONUCLEASE I-DMOI
Source (2VS8)
Sequence A:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLPP
B:  GCCTTGCCGGGTAA
C:  GTTCCGGCGCG
D:  CGCGCCGGAACTTAC
E:  CCGGCAAGGC
F:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLPPEAAALEHH
G:  GCCTTGCCGGGTAA
H:  GTTCCGGCGCG
I:  CGCGCCGGAACTTAC
J:  CCGGCAAGGC
K:  NVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSE
NLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSK
KLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRL
RIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNI
SLRDRIKFVHTILSSHL
L:  GCCTTGCCGGGTAA
M:  GTTCCGGCGCG
N:  CGCGCCGGAACTTAC
O:  CCGGCAAGGC
Description


Functional site

1) chain A
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN A1188
source : AC1

2) chain A
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN A1188
source : AC1

3) chain B
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MN A1188
source : AC1

4) chain E
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MN A1188
source : AC1

5) chain A
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MN A1189
source : AC2

6) chain A
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN A1189
source : AC2

7) chain C
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MN A1189
source : AC2

8) chain D
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MN A1189
source : AC2

9) chain F
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MN F1196
source : AC3

10) chain F
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN F1196
source : AC3

11) chain H
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MN F1196
source : AC3

12) chain I
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MN F1196
source : AC3

13) chain F
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN F1197
source : AC4

14) chain F
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN F1197
source : AC4

15) chain G
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MN F1197
source : AC4

16) chain J
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MN F1197
source : AC4

17) chain K
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MN K1183
source : AC5

18) chain K
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MN K1183
source : AC5

19) chain L
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MN K1183
source : AC5

20) chain O
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MN K1183
source : AC5

21) chain K
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MN K1184
source : AC6

22) chain K
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN K1184
source : AC6

23) chain M
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MN K1184
source : AC6

24) chain N
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MN K1184
source : AC6

25) chain F
residue 114
type
sequence Y
description BINDING SITE FOR RESIDUE ACT F1198
source : AC7

26) chain F
residue 120
type
sequence K
description BINDING SITE FOR RESIDUE ACT F1198
source : AC7

27) chain F
residue 178
type
sequence L
description BINDING SITE FOR RESIDUE ACT F1198
source : AC7

28) chain F
residue 186
type
sequence P
description BINDING SITE FOR RESIDUE ACT F1198
source : AC7

29) chain F
residue 188
type
sequence E
description BINDING SITE FOR RESIDUE ACT F1198
source : AC7

30) chain A
residue 111
type
sequence K
description BINDING SITE FOR RESIDUE ACT A1190
source : AC8

31) chain A
residue 183
type
sequence N
description BINDING SITE FOR RESIDUE ACT A1190
source : AC8

32) chain A
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE ACT A1191
source : AC9

33) chain A
residue 134
type
sequence L
description BINDING SITE FOR RESIDUE ACT A1191
source : AC9

34) chain A
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

35) chain A
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

36) chain F
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

37) chain F
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

38) chain K
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

39) chain K
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1


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