|
eF-site ID
|
2vrt-D |
PDB Code
|
2vrt |
Chain
|
D |
|
click to enlarge
|
|
Title
|
Crystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic Domain |
Classification
|
HYDROLASE |
Compound
|
RIBONUCLEASE E |
Source
|
Escherichia coli (strain K12) (2VRT) |
|
Sequence
|
D: |
MKRMLINATQQEELRVALVDGQRLYDLDIESPEQKKANIY
KGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPRPN
IKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVL
MPNNPRAGGISRRIEDDRTELKEALASLELPEGMGLIVRT
AGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQE
SNVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRP
DFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGS
IVIDSTEALTAIDINSARDIEETAFNTNLEAADEIARQLR
LRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQ
ISHISRFGLLEMSRQRLSSHHVCPRCSGTGTVRDNESLSL
SILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNA
IETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYM
LPKLHEE
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
D |
residue |
404 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN D1509
|
source |
: AC2
|
|
2)
|
chain |
D |
residue |
407 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN D1509
|
source |
: AC2
|
|
3)
|
chain |
D |
residue |
303 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000269|PubMed:16237448
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
4)
|
chain |
D |
residue |
346 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000269|PubMed:16237448
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
5)
|
chain |
D |
residue |
404 |
type |
BINDING |
sequence |
C
|
description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
6)
|
chain |
D |
residue |
407 |
type |
BINDING |
sequence |
C
|
description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|