|
|
eF-site ID
|
2vrt-B |
|
PDB Code
|
2vrt |
|
Chain
|
B |
|
click to enlarge
|
|
|
Title
|
Crystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic Domain |
|
Classification
|
HYDROLASE |
|
Compound
|
RIBONUCLEASE E |
|
Source
|
Escherichia coli (strain K12) (2VRT) |
|
|
Sequence
|
B: |
MKRMLINATQQEELRVALVDGQRLYDLDIFISLAGSYLVL
MPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVR
TAGVSAEALQWDLSFRLKHWEAIKKAAESAPFLIHQNVIV
RAFRDYLRDIGEILIDNPKVLELARQHIAPDFSSKIKLYT
GEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSAGDIEETAFNTNLEAADEIARQLRLRDLGGLIVI
DFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLL
EMSRQRLSPSHHVCPRCSGTGTVRDNESLSLSILRLIEEE
ALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVR
CVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
B |
| residue |
404 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN A1506
|
| source |
: AC1
|
|
|
2)
|
chain |
B |
| residue |
407 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN A1506
|
| source |
: AC1
|
|
|
3)
|
chain |
B |
| residue |
303 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:16237448
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
4)
|
chain |
B |
| residue |
346 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:16237448
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
5)
|
chain |
B |
| residue |
404 |
| type |
BINDING |
| sequence |
C
|
| description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
6)
|
chain |
B |
| residue |
407 |
| type |
BINDING |
| sequence |
C
|
| description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|