|
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eF-site ID
|
2vrt-C |
|
PDB Code
|
2vrt |
|
Chain
|
C |
|
click to enlarge
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Title
|
Crystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic Domain |
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Classification
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HYDROLASE |
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Compound
|
RIBONUCLEASE E |
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Source
|
Escherichia coli (strain K12) (2VRT) |
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Sequence
|
C: |
MKRMLINATQQEELRVALVDGQRLYDLDIESPFISLAGSY
LVLMPNNPRAGGISRRIEGDELKEALASLELPEGMGLIVR
TAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQ
NVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPD
FSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSI
VIDSTEALTAIDINSAGDIEETAFNTNLEAADEIARQLRL
RDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQI
SHISRFGLLEMSRQRLSLGESSHHVCPRCSGTGTVRDNES
LSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSA
VNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTL
SYMLPKLHEEA
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Description
|
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Functional site
|
|
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1)
|
chain |
C |
| residue |
404 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN D1509
|
| source |
: AC2
|
|
|
2)
|
chain |
C |
| residue |
407 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN D1509
|
| source |
: AC2
|
|
|
3)
|
chain |
C |
| residue |
303 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:16237448
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
4)
|
chain |
C |
| residue |
346 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:16237448
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
5)
|
chain |
C |
| residue |
404 |
| type |
BINDING |
| sequence |
C
|
| description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
6)
|
chain |
C |
| residue |
407 |
| type |
BINDING |
| sequence |
C
|
| description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|