eF-site ID 2vqv-AB
PDB Code 2vqv
Chain A, B

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Title Structure of HDAC4 catalytic domain with a gain-of-function mutation bound to a hydroxamic acid inhibitor
Classification HYDROLASE
Compound HISTONE DEACETYLASE 4
Source Homo sapiens (Human) (HDAC4_HUMAN)
Sequence A:  RFTTGLVYDTLMLKHAGRIQSIWSRLQETGLRGKCEAIRG
RKATLEELQTVHSEAHTLLYGTNPDTIWNEVHSAGAARLA
VGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCY
FNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSD
PSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAF
TGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFD
AVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEG
GYDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAV
RSMEKVMEIHSKYWRCLQRTTSTAGRSLIEAQTCE
B:  RFTTGLVYDTLMLKHAGRIQSIWSRLQETGLRGKCEAIRG
RKATLEELQTVHSEAHTLLYGTNPLDTIWNEVHSAGAARL
AVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFC
YFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYS
DPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMA
FTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGF
DAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALE
GGYDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANA
VRSMEKVMEIHSKYWRCLQRTTSTAGRSLIEAQTCE
Description


Functional site

1) chain A
residue 367
type
sequence A
description BINDING SITE FOR RESIDUE SO4 A 1406
source : AC1

2) chain B
residue 72
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 1406
source : AC2

3) chain B
residue 73
type
sequence E
description BINDING SITE FOR RESIDUE SO4 B 1406
source : AC2

4) chain B
residue 256
type
sequence P
description BINDING SITE FOR RESIDUE SO4 B 1407
source : AC3

5) chain B
residue 366
type
sequence N
description BINDING SITE FOR RESIDUE SO4 B 1407
source : AC3

6) chain B
residue 367
type
sequence A
description BINDING SITE FOR RESIDUE SO4 B 1407
source : AC3

7) chain B
residue 20
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 1408
source : AC4

8) chain B
residue 37
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1408
source : AC4

9) chain B
residue 154
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1408
source : AC4

10) chain A
residue 194
type
sequence D
description BINDING SITE FOR RESIDUE K A 1407
source : AC5

11) chain A
residue 196
type
sequence D
description BINDING SITE FOR RESIDUE K A 1407
source : AC5

12) chain A
residue 198
type
sequence H
description BINDING SITE FOR RESIDUE K A 1407
source : AC5

13) chain A
residue 217
type
sequence S
description BINDING SITE FOR RESIDUE K A 1407
source : AC5

14) chain A
residue 218
type
sequence L
description BINDING SITE FOR RESIDUE K A 1407
source : AC5

15) chain A
residue 207
type
sequence F
description BINDING SITE FOR RESIDUE K A 1408
source : AC6

16) chain A
residue 210
type
sequence D
description BINDING SITE FOR RESIDUE K A 1408
source : AC6

17) chain A
residue 213
type
sequence V
description BINDING SITE FOR RESIDUE K A 1408
source : AC6

18) chain A
residue 244
type
sequence F
description BINDING SITE FOR RESIDUE K A 1408
source : AC6

19) chain B
residue 194
type
sequence D
description BINDING SITE FOR RESIDUE K B 1409
source : AC7

20) chain B
residue 196
type
sequence D
description BINDING SITE FOR RESIDUE K B 1409
source : AC7

21) chain B
residue 198
type
sequence H
description BINDING SITE FOR RESIDUE K B 1409
source : AC7

22) chain B
residue 217
type
sequence S
description BINDING SITE FOR RESIDUE K B 1409
source : AC7

23) chain B
residue 218
type
sequence L
description BINDING SITE FOR RESIDUE K B 1409
source : AC7

24) chain B
residue 207
type
sequence F
description BINDING SITE FOR RESIDUE K B 1410
source : AC8

25) chain B
residue 210
type
sequence D
description BINDING SITE FOR RESIDUE K B 1410
source : AC8

26) chain B
residue 213
type
sequence V
description BINDING SITE FOR RESIDUE K B 1410
source : AC8

27) chain B
residue 244
type
sequence F
description BINDING SITE FOR RESIDUE K B 1410
source : AC8

28) chain A
residue 156
type
sequence P
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

29) chain A
residue 159
type
sequence H
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

30) chain A
residue 167
type
sequence G
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

31) chain A
residue 168
type
sequence F
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

32) chain A
residue 198
type
sequence H
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

33) chain A
residue 227
type
sequence F
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

34) chain A
residue 290
type
sequence D
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

35) chain A
residue 330
type
sequence G
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

36) chain A
residue 332
type
sequence Y
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

37) chain B
residue 78
type
sequence L
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

38) chain B
residue 79
type
sequence Y
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

39) chain B
residue 81
type
sequence T
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

40) chain B
residue 124
type
sequence A
description BINDING SITE FOR RESIDUE HA3 A 1409
source : AC9

41) chain A
residue 78
type
sequence L
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

42) chain A
residue 79
type
sequence Y
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

43) chain A
residue 81
type
sequence T
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

44) chain A
residue 124
type
sequence A
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

45) chain B
residue 156
type
sequence P
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

46) chain B
residue 159
type
sequence H
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

47) chain B
residue 167
type
sequence G
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

48) chain B
residue 168
type
sequence F
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

49) chain B
residue 198
type
sequence H
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

50) chain B
residue 227
type
sequence F
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

51) chain B
residue 290
type
sequence D
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

52) chain B
residue 332
type
sequence Y
description BINDING SITE FOR RESIDUE HA3 B 1411
source : BC1

53) chain A
residue 196
type
sequence D
description BINDING SITE FOR RESIDUE ZN A 1410
source : BC2

54) chain A
residue 198
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1410
source : BC2

55) chain A
residue 290
type
sequence D
description BINDING SITE FOR RESIDUE ZN A 1410
source : BC2

56) chain B
residue 196
type
sequence D
description BINDING SITE FOR RESIDUE ZN B 1412
source : BC3

57) chain B
residue 198
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1412
source : BC3

58) chain B
residue 290
type
sequence D
description BINDING SITE FOR RESIDUE ZN B 1412
source : BC3

59) chain A
residue 159
type ACT_SITE
sequence H
description ACT_SITE => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

60) chain B
residue 159
type ACT_SITE
sequence H
description ACT_SITE => ECO:0000250
source Swiss-Prot : SWS_FT_FI1


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