eF-site ID 2vpl-AC
PDB Code 2vpl
Chain A, C

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Title The structure of the complex between the first domain of L1 protein from Thermus thermophilus and mRNA from Methanococcus jannaschii
Classification TRANSLATION
Compound 50S RIBOSOMAL PROTEIN L1
Source (2VPL)
Sequence A:  PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDET
VEVHAKLGIDPRRSDQNVRGTVSLPHGGRIEFRNDKTGAI
HAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRS
VYVTTTMGPSVRINPHS
C:  PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDET
VEVHAKLGIDPRRSDQNVRGTVSLPHGGRIEFRNDKTGAI
HAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRS
VYVTTTMGPSVRINPHS
Description


Functional site

1) chain A
residue 42
type
sequence E
description BINDING SITE FOR RESIDUE K A 1229
source : AC1

2) chain A
residue 216
type
sequence T
description BINDING SITE FOR RESIDUE K A 1229
source : AC1

3) chain A
residue 217
type
sequence T
description BINDING SITE FOR RESIDUE K A 1229
source : AC1

4) chain C
residue 42
type
sequence E
description BINDING SITE FOR RESIDUE K C 1229
source : AC2

5) chain C
residue 216
type
sequence T
description BINDING SITE FOR RESIDUE K C 1229
source : AC2

6) chain C
residue 217
type
sequence T
description BINDING SITE FOR RESIDUE K C 1229
source : AC2

7) chain A
residue 1-46
type prosite
sequence PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDET
VEVHAK
description TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. pkhgkryrallekvdpnkiytideaahlvkelatakfd.............................................................................ETVEVHAK
source prosite : PS00430


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